RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 DPH3P1Q9H4G8 78 aa12.17□□□□□ -0.46
AGRN-210ENST00000620552 CALYQ9NYX4 217 aa12.17□□□□□ -0.46
AGRN-210ENST00000620552 ISLRO14498 428 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 HIST1H1BP16401 226 aaKnown RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 TCTAP57738 103 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 LMX1BO60663 402 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 IGF2P01344 180 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 ANGPTL6Q8NI99 470 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 DDB2Q92466 427 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 PLAUP00749 431 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 TLNRD1Q9H1K6 362 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 ELOVL5Q9NYP7 299 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 PITPNC1Q9UKF7 332 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 INTS1Q8N201 2190 aaKnown RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 H3BVH4 76 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 NDUFA2O43678 99 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 BTF3P20290 206 aaKnown RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 EIF4EBP2Q13542 120 aaPredicted RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 TCTEX1D1Q8N7M0 179 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 NPVFQ9HCQ7 196 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 ZNF107Q9UII5 783 aaPredicted RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 PXMP4Q9Y6I8 212 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 RPL8P62917 257 aaKnown RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 GPX7Q96SL4 187 aaPredicted RBP12.16□□□□□ -0.46
AGRN-210ENST00000620552 RBKSQ9H477 322 aa12.16□□□□□ -0.46
AGRN-210ENST00000620552 M0R3E3 92 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 SLC25A17O43808 307 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 THY1P04216 161 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 PGA5P0DJD9 388 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 IER3P46695 156 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 MIXL1Q9H2W2 232 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 TMEM189A5PLL7 270 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 ZNF253O75346 499 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 SRSF9Q13242 221 aaKnown RBP eCLIP12.15□□□□□ -0.46
AGRN-210ENST00000620552 AMMECR1LQ6DCA0 310 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 FAM181AQ8N9Y4 354 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 SIGLEC12Q96PQ1 595 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 TP53BP1Q12888 1972 aaPredicted RBP12.15□□□□□ -0.46
AGRN-210ENST00000620552 LCN2P80188 198 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 OR11H7Q8NGC8 314 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 NYNRINQ9P2P1 1898 aaKnown RBP12.15□□□□□ -0.46
AGRN-210ENST00000620552 HIST3H3Q16695 136 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 C19orf54Q5BKX5 351 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 PTX4Q96A99 478 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 SMIM12Q96EX1 92 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 TRIOBPQ9H2D6 2365 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 PNRC1Q12796 327 aaPredicted RBP12.15□□□□□ -0.46
AGRN-210ENST00000620552 FAM106AQ4KMX7 169 aa12.15□□□□□ -0.46
AGRN-210ENST00000620552 FAM53AQ6NSI3 398 aaPredicted RBP12.15□□□□□ -0.46
AGRN-210ENST00000620552 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 ELOBQ15370 118 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 KCNK17Q96T54 332 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 KCNK7Q9Y2U2 307 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 TMEM56-RWDD3S4R434 201 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 SYNGR3O43761 229 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 C8orf82Q6P1X6 216 aaPredicted RBP12.14□□□□□ -0.47
AGRN-210ENST00000620552 TMEM91Q6ZNR0 172 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 LOC285556D6RIA3 1793 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 PRSS53Q2L4Q9 553 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 CXorf66Q5JRM2 361 aaPredicted RBP12.14□□□□□ -0.47
AGRN-210ENST00000620552 TRBV5-3A0A0A0MS03 114 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 RPL29P47914 159 aaKnown RBP12.14□□□□□ -0.47
AGRN-210ENST00000620552 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 TUBA4BQ9H853 241 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 LIPFP07098 398 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 RCC1P18754 421 aaPredicted RBP12.14□□□□□ -0.47
AGRN-210ENST00000620552 APOBEC3AP31941 199 aaPredicted RBP12.14□□□□□ -0.47
AGRN-210ENST00000620552 MFAP4P55083 255 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 AWAT1Q58HT5 328 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 PNKDQ8N490 385 aa12.14□□□□□ -0.47
AGRN-210ENST00000620552 CD81P60033 236 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 SNRPEP62304 92 aaKnown RBP12.13□□□□□ -0.47
AGRN-210ENST00000620552 FAM74A3Q4VXF1 159 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 ISOC2Q96AB3 205 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 ST6GAL2Q96JF0 529 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
AGRN-210ENST00000620552 AHCTF1Q8WYP5 2266 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 A0A1W2PP11 408 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 ZNF207O43670 478 aaKnown RBP12.13□□□□□ -0.47
AGRN-210ENST00000620552 CDS2O95674 445 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 CEACAM1P13688 526 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 POM121Q96HA1 1249 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 C4orf51C9J302 202 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 H0Y980 276 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 FOXH1O75593 365 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 KLF7O75840 302 aaPredicted RBP12.13□□□□□ -0.47
AGRN-210ENST00000620552 GCSHP23434 173 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 OR52M1Q8NGK5 317 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 ODAMA1E959 279 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 SNURFLB1AK76 121 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 B9A039 149 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 SSTR5P35346 364 aa12.13□□□□□ -0.47
AGRN-210ENST00000620552 GZMMP51124 257 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms