RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 ACSM6Q6P461 480 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 ODF3L1Q8IXM7 274 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 TCTEX1D1Q8N7M0 179 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 PYGO2Q9BRQ0 406 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 FSCN3Q9NQT6 498 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 CLCF1Q9UBD9 225 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 FBXL7Q9UJT9 491 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 WASHC3Q9Y3C0 194 aa8.35□□□□□ -1.07
TNFAIP3-210ENST00000620204 CTXND1A0A1B0GTU2 59 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 TMEM250H0YL14 139 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ITGB1BP1O14713 200 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 PDLIM4P50479 330 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 DNASE2BQ8WZ79 361 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ST8SIA1Q92185 356 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF501Q96CX3 271 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 FAM122AQ96E09 287 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 IL36RNQ9UBH0 155 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 PXMP4Q9Y6I8 212 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGHMP01871 453 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 RELBQ01201 579 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF816Q0VGE8 651 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 PHYHD1Q5SRE7 291 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR8I2Q8N0Y5 310 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF808Q8N4W9 903 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF114Q8NC26 417 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 OR10P1Q8NGE3 313 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ZNF837Q96EG3 531 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 RNF2Q99496 336 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 CACNA1HO95180 2353 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 A6NCN8 305 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 A8MXE2 369 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 ETV2O00321 342 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 FRMD6-AS1P0C7T7 363 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 B4GALT1P15291 398 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 CDC34P49427 236 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 IGLV3-21P80748 117 aaPredicted RBP8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 LRRC75BQ2VPJ9 315 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 CLEC2AQ6UVW9 174 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 SPSB1Q96BD6 273 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 SFRP2Q96HF1 295 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 TMEM56Q96MV1 263 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 PCED1AQ9H1Q7 454 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 SIT1Q9Y3P8 196 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 R4GN57 208 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 TMEM56-RWDD3S4R434 201 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 FER1L5A0AVI2 2057 aa8.34□□□□□ -1.07
TNFAIP3-210ENST00000620204 DPRXA6NFQ7 191 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 CXCL12P48061 93 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 LCN2P80188 198 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 SSPNQ14714 243 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 PRR27Q6MZM9 219 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 PRR19A6NJB7 356 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 TRAF3IP2O43734 574 aaPredicted RBP8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 EFNA2O43921 213 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 DNAJC13O75165 2243 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 HYPMO75409 117 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 TFF3Q07654 80 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 LINC01551Q86U37 167 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 KMT5CQ86Y97 462 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 BCL2L2Q92843 193 aaPredicted RBP8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 OXGR1Q96P68 337 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 UCN2Q96RP3 112 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 MRPL13Q9BYD1 178 aaKnown RBP8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 PI4KAP42356 2102 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 DHHO43323 396 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 NDUFB8O95169 186 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 IGKV3-11P04433 115 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 IGHV4-34P06331 123 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 UCP1P25874 307 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 ZP4Q12836 540 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 MAFAQ8NHW3 353 aaPredicted RBP8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 NUDT11Q96G61 164 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 ZNF488Q96MN9 340 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 DECR2Q9NUI1 292 aa8.33□□□□□ -1.08
TNFAIP3-210ENST00000620204 ODAMA1E959 279 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 FOXI3A8MTJ6 420 aaPredicted RBP8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 HSBP1O75506 76 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 PSG1P11464 419 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 CCL2P13500 99 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 CDKN1BP46527 198 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 GABRA2P47869 451 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 GPM6AP51674 278 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 FXYD3Q14802 87 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 PDLIM3Q53GG5 364 aaPredicted RBP8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 STUMQ69YW2 141 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 SLC25A47Q6Q0C1 308 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 TEX43Q6ZNM6 134 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 LHFPL2Q6ZUX7 228 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 SLC22A18ASQ8N1D0 253 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 OR10G3Q8NGC4 313 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 HIPK2Q9H2X6 1198 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 BCL3P20749 454 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 TNFSF4P23510 183 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 ZC2HC1AQ96GY0 325 aa8.32□□□□□ -1.08
TNFAIP3-210ENST00000620204 PNRC2Q9NPJ4 139 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms