RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 RPL8P62917 257 aaKnown RBP9.72□□□□□ -0.85
CCDC144B-208ENST00000618081 PLPPR5Q32ZL2 321 aa9.72□□□□□ -0.85
CCDC144B-208ENST00000618081 WDFY1Q8IWB7 410 aa9.72□□□□□ -0.85
CCDC144B-208ENST00000618081 A0A087X0M5 115 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 A0A1B0GX30 115 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 TFPI2P48307 235 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 NKX2-6A6NCS4 301 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 PAGE4O60829 102 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 PPP1R17O96001 155 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 FAM214BQ7L5A3 538 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 TRAV30A0A087WSZ9 112 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 HYAL3O43820 417 aaPredicted RBP9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 ADAP1O75689 374 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 FTH1P19P0C7X4 201 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 SERF2P84101 59 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 EWSR1Q01844 656 aaKnown RBP eCLIP9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 FUT9Q9Y231 359 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 CTSSP25774 331 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 RPS20P60866 119 aaKnown RBP9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.85
CCDC144B-208ENST00000618081 C9orf40Q8IXQ3 194 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 RNF133Q8WVZ7 376 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 TUBA4BQ9H853 241 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 OPN4Q9UHM6 478 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 ATP5G2Q06055 141 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 CXorf66Q5JRM2 361 aaPredicted RBP9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 ALG14Q96F25 216 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 DUX5Q96PT3 197 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 SPTAN1Q13813 2472 aaKnown RBP9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 HBZP02008 142 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 FAM3BP58499 235 aaPredicted RBP9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 NSUN5P2Q63ZY6 315 aa9.71□□□□□ -0.86
CCDC144B-208ENST00000618081 NUTF2P61970 127 aaKnown RBP9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 H1FOOQ8IZA3 346 aaPredicted RBP9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 RNF115Q9Y4L5 304 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 OR10AC1Q8NH08 325 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 H7C2G1 150 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 MMP9P14780 707 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 PDLIM4P50479 330 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 ABLIM2Q6H8Q1 611 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 hCG_38984A0A1B0GV85 526 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 IFITM10A6NMD0 228 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 CA2P00918 260 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 NAT2P11245 290 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 MFAP4P55083 255 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF721Q8TF20 911 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 IGKV3D-15A0A087WSY6 115 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 IGHV1-45A0A0A0MS14 117 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 H0Y980 276 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 MGST3O14880 152 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 IGKV3-15P01624 115 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 ADAD2Q8NCV1 583 aaKnown RBP9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 DNAL4O96015 105 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 MMD2Q8IY49 270 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 DLX6P56179 175 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 SLC25A53Q5H9E4 307 aa9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 GEMIN7Q9H840 131 aaKnown RBP9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 RCC2Q9P258 522 aaKnown RBP9.7□□□□□ -0.86
CCDC144B-208ENST00000618081 CGB1A6NKQ9 187 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 DLL1O00548 723 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 PCSK4Q6UW60 755 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 CENPVQ7Z7K6 275 aaPredicted RBP9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 CCL13Q99616 98 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 FGF12P61328 243 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 FAM27BQ5VT28 67 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF880Q6PDB4 577 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 LYZL2Q7Z4W2 148 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 MAP1LC3AQ9H492 121 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 PXMP4Q9Y6I8 212 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 MFAP2P55001 183 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 PAM16Q9Y3D7 125 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 ZNF385DQ9H6B1 395 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 RBFOX2O43251 390 aaKnown RBP eCLIP9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 JOSD1Q15040 202 aaPredicted RBP9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 BVESQ8NE79 360 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 OR4C13Q8NGP0 309 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 SOSTQ9BQB4 213 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 BGLAPP02818 100 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 TCTAP57738 103 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 FLRT3Q9NZU0 649 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 C17orf51A8MQB3 221 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 PRSS2P07478 247 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 LGALS3P17931 250 aaKnown RBP9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 HINT1P49773 126 aaPredicted RBP9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 OR8G5Q8NG78 346 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 VN1R17PQ8TDU5 208 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 WNT2BQ93097 391 aa9.69□□□□□ -0.86
CCDC144B-208ENST00000618081 HRKO00198 91 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 POM121Q96HA1 1249 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 LOC105371242A0A075B767 164 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 H3BQ15 152 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 HOXB1P14653 301 aaPredicted RBP9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 SPINK2P20155 84 aa9.68□□□□□ -0.86
CCDC144B-208ENST00000618081 CD81P60033 236 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms