RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TCTAP57738 103 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 TNFRSF9Q07011 255 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 MIA3Q5JRA6 1907 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 FOCADQ5VW36 1801 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 IER2Q9BTL4 223 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 LHFPL6Q9Y693 200 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 A0A087WWC5 75 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 GCSHP23434 173 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 HOXA4Q00056 320 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 MUC15Q8N387 334 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 LSM10Q969L4 123 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 SFRP2Q96HF1 295 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 HIGD1AQ9Y241 93 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 FAM157AC9JC47 383 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 LINC00869P0C866 280 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 A0A0J9YW62 118 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 DPRXA6NFQ7 191 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 SRP19P09132 144 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 ZNF735P0CB33 412 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 MAS1LP35410 378 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 ZNF645Q8N7E2 425 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 ZNF256Q9Y2P7 627 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 LTBP4Q8N2S1 1624 aa9.2□□□□□ -0.94
CLTCL1-209ENST00000617103 LY75O60449 1722 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 LOC107984156A0A0G2JMH3 177 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 ERVFRD-1P60508 538 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 CYP2G1PQ6ZSU1 146 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 ERASQ7Z444 233 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 ARL17AQ8IVW1 177 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 UBALD2Q8IYN6 164 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 CEP290O15078 2479 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 TRAV14DV4A0A0A6YYC5 116 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 CEACAM18A8MTB9 384 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 BTCP35070 178 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 FXYD3Q14802 87 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 LRRC75BQ2VPJ9 315 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 MTURNQ8N3F0 131 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 RCC1LQ96I51 464 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 TMEM70Q9BUB7 260 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 INSIG2Q9Y5U4 225 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 TUBGCP6Q96RT7 1819 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 IGKV1D-42A0A075B6H8 117 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 SHISA7A6NL88 538 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 CLDN14O95500 239 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 ARL14EPLP0DKL9 152 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 LGALS7P47929 136 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 FBXW9Q5XUX1 488 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 GUCD1Q96NT3 240 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 PMCHL2Q9BQD1 86 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 OR2J1Q9GZK6 312 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 DOCK1Q14185 1865 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 KIAA1217Q5T5P2 1943 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 MGST3O14880 152 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 PRDX2P32119 198 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 OTX1P32242 354 aaPredicted RBP9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 SPANXN1Q5VSR9 72 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 ZNF841Q6ZN19 808 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 ATOH7Q8N100 152 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 GPHA2Q96T91 129 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 NDUFAF3Q9BU61 184 aa9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 PEF1Q9UBV8 284 aaKnown RBP9.19□□□□□ -0.94
CLTCL1-209ENST00000617103 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 PGPA6NDG6 321 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 SH2D7A6NKC9 451 aaPredicted RBP9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 CKS2P33552 79 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 MAGEA5P43359 124 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 GFRALQ6UXV0 394 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 ZNF788Q6ZQV5 615 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 SCNM1Q9BWG6 230 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 HES7Q9BYE0 225 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 TCFL5Q9UL49 500 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 CBLN1P23435 193 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 CRYBB3P26998 211 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 COL10A1Q03692 680 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 ZNF502Q8TBZ5 544 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 ARRDC1-AS1Q9H2J1 176 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 DNAJC4Q9NNZ3 241 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 APC2O95996 2303 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 MCM3APO60318 1980 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 NPIPB7O75200 414 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 OR2H2O95918 312 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 C8orf88P0DMB2 117 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 AREGP15514 252 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 C9orf50Q5SZB4 431 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 FHL5Q5TD97 284 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 MDP1Q86V88 176 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 OR1N2Q8NGR9 330 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 OR10AG1Q8NH19 301 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 CTHRC1Q96CG8 243 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 C1RLQ9NZP8 487 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 AUP1Q9Y679 476 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 SVILO95425 2214 aa9.18□□□□□ -0.94
CLTCL1-209ENST00000617103 PPIHO43447 177 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-209ENST00000617103 SNRPCP09234 159 aaKnown RBP9.17□□□□□ -0.94
CLTCL1-209ENST00000617103 NUBP1P53384 320 aa9.17□□□□□ -0.94
CLTCL1-209ENST00000617103 TPRX1Q8N7U7 411 aa9.17□□□□□ -0.94
CLTCL1-209ENST00000617103 ZCCHC14Q8WYQ9 949 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms