RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ZNF17P17021 662 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 EFNB2P52799 333 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 TLE1Q04724 770 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 KCNIP4Q6PIL6 250 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 NEUROG1Q92886 237 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 KISS1RQ969F8 398 aaPredicted RBP13.08□□□□□ -0.31
NOP56-220ENST00000616692 NXF5Q9H1B4 397 aaKnown RBP13.08□□□□□ -0.31
NOP56-220ENST00000616692 ZDHHC11Q9H8X9 412 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 PNRC2Q9NPJ4 139 aaKnown RBP13.08□□□□□ -0.31
NOP56-220ENST00000616692 KCNIP1Q9NZI2 227 aa13.08□□□□□ -0.31
NOP56-220ENST00000616692 TRAV9-2A0A087WT02 112 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 DEDDO75618 318 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 SERPINE2P07093 398 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 GPR1P46091 355 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 ALG10Q5BKT4 473 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 MRPL54Q6P161 138 aaKnown RBP13.08□□□□□ -0.32
NOP56-220ENST00000616692 OR2K2Q8NGT1 345 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 MS4A5Q9H3V2 200 aa13.08□□□□□ -0.32
NOP56-220ENST00000616692 NXT1Q9UKK6 140 aaKnown RBP13.08□□□□□ -0.32
NOP56-220ENST00000616692 IGHV1OR21-1A0A087WYE8 117 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 MEGF11A6BM72 1044 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 HS3ST1O14792 307 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 GPX1P07203 203 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 CELA3BP08861 270 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 WT1P19544 449 aaPredicted RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 ADMP35318 185 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 OR1D5P58170 312 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 STUMQ69YW2 141 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 FAM103A1Q9BTL3 118 aaKnown RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 KIF26BQ2KJY2 2108 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 NPIPB5A8MRT5 1133 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 CLEC3AO75596 197 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 HBE1P02100 147 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 MRPL3P09001 348 aaKnown RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 LIFP15018 202 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 IL3RAP26951 378 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 POU3F1Q03052 451 aaPredicted RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 PLXDC2Q6UX71 529 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 SLC35F2Q8IXU6 374 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 GRAMD2BQ96HH9 432 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 JMJD8Q96S16 334 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 NRN1Q9NPD7 142 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 KLHL13Q9P2N7 655 aa13.07□□□□□ -0.32
NOP56-220ENST00000616692 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
NOP56-220ENST00000616692 DUX1O43812 170 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 SLC25A6P12236 298 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 IGFBP2P18065 325 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 STAC2Q6ZMT1 411 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 ZNF611Q8N823 705 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 LINC01555Q8NAE3 123 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 OR2G3Q8NGZ4 309 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 DUX5Q96PT3 197 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 TNFRSF13CQ96RJ3 184 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 SDF2Q99470 211 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 RTN4RQ9BZR6 473 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 LYRM4Q9HD34 91 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 NKX2-8O15522 239 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 ABHD16AO95870 558 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 AADACP22760 399 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 PCK2Q16822 640 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.06□□□□□ -0.32
NOP56-220ENST00000616692 OR4K13Q8NH42 304 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 OR10G6Q8NH81 332 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 PLEKHF2Q9H8W4 249 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 NECAP2Q9NVZ3 263 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 CLCF1Q9UBD9 225 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 B3GALT5Q9Y2C3 310 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 C9orf118A6NHY6 69 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 C17orf112F2Z3M2 114 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 DEGS1O15121 323 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 CCL4P13236 92 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 ADRA2CP18825 462 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 TIA1P31483 386 aaKnown RBP eCLIP13.06□□□□□ -0.323e-20■■■□□ 16.7
NOP56-220ENST00000616692 TAS2R50P59544 299 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 GLIPR1L1Q6UWM5 242 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 C8orf86Q6ZUL3 223 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 ATOH7Q8N100 152 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 TMEM123Q8N131 208 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 ZFP62Q8NB50 900 aaPredicted RBP13.06□□□□□ -0.32
NOP56-220ENST00000616692 MBD6Q96DN6 1003 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 PELI1Q96FA3 418 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 NUDT22Q9BRQ3 303 aa13.06□□□□□ -0.32
NOP56-220ENST00000616692 WDR61Q9GZS3 305 aaKnown RBP13.06□□□□□ -0.32
NOP56-220ENST00000616692 SMIM9A6NGZ8 99 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 RELBQ01201 579 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 IGFBP7Q16270 282 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 ZNF584Q8IVC4 421 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 ARHGEF39Q8N4T4 335 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 SKA2Q8WVK7 121 aaPredicted RBP13.05□□□□□ -0.32
NOP56-220ENST00000616692 ANAPC16Q96DE5 110 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 BANF2Q9H503 90 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 CISD1Q9NZ45 108 aaKnown RBP13.05□□□□□ -0.32
NOP56-220ENST00000616692 PILRAQ9UKJ1 303 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 SPINK8P0C7L1 97 aa13.05□□□□□ -0.32
NOP56-220ENST00000616692 LINC00869P0C866 280 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms