RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SLC33A1O00400 549 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 NAPSAO96009 420 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 MUC1P15941 1255 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 AANATQ16613 207 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 C6orf183Q5T699 404 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 HCP5Q6MZN7 132 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 LIAT1Q6ZQX7 453 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR4A4PQ8NGN8 299 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 C8orf46Q8TAG6 207 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 PIFOQ8TCI5 191 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 H1FXQ92522 213 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 GAFA1Q96PS6 74 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 HDHD3Q9BSH5 251 aaPredicted RBP14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 GHITMQ9H3K2 345 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 METTL8Q9H825 291 aaKnown RBP14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 SLC23A1Q9UHI7 598 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 FLVCR2Q9UPI3 526 aa14.13□□□□□ -0.15
TRAPPC3-209ENST00000616395 FAM172BPA6NC97 362 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 NKX6-3A6NJ46 265 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 FABP7O15540 132 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 NDUFB3O43676 98 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 DUS4LO95620 317 aaKnown RBP14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 PF4P02776 101 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 ANXA7P20073 488 aaKnown RBP14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 PRDX2P32119 198 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 CEBPDP49716 269 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 CASC10Q5T4H9 136 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 LIN54Q6MZP7 749 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 SLC36A1Q7Z2H8 476 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 ASB13Q8WXK3 278 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 MAFIPQ8WZ33 124 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF2Q9BSG1 426 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 IL36RNQ9UBH0 155 aa14.12□□□□□ -0.15
TRAPPC3-209ENST00000616395 IGKV1D-17A0A075B6S4 117 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 PIGBOS1A0A0B4J2F0 54 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 RFPL4AA6NLU0 287 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR2AT4A6NND4 320 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 RFPL4AL1F8VTS6 287 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 GABRA2P47869 451 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 ABCA11PQ4W5N1 156 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF626Q68DY1 528 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 DHRS11Q6UWP2 260 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF497Q6ZNH5 498 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 SLC25A42Q86VD7 318 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 ASCC1Q8N9N2 400 aaKnown RBP14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR13C8Q8NGS7 320 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 ANGPTL6Q8NI99 470 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF431Q8TF32 576 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 SNX22Q96L94 193 aa14.11□□□□□ -0.15
TRAPPC3-209ENST00000616395 M0R1W7 72 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 SDCBPO00560 298 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR4E1P0C645 316 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 PSG2P11465 335 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 ANXA3P12429 323 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 HLA-DRB3P79483 266 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 CD83Q01151 205 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 TMEM128Q5BJH2 165 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 LRRC10Q5BKY1 277 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 ATPAF1Q5TC12 328 aaPredicted RBP14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF788Q6ZQV5 615 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 RTN4RL2Q86UN3 420 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF561Q8N587 486 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 CCDC71LQ8N9Z2 235 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 OR10J5Q8NHC4 309 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 MRPL30Q8TCC3 161 aaKnown RBP14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 MARCH1Q8TCQ1 289 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 PHB2Q99623 299 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF222Q9UK12 451 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 KCNIP3Q9Y2W7 256 aa14.1□□□□□ -0.15
TRAPPC3-209ENST00000616395 A0A0B4J293 547 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 MGST3O14880 152 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 SNAPC5O75971 98 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 GSTT2P0CG29 244 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF728P0DKX0 622 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZFP69Q49AA0 526 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 LHFPL1Q86WI0 220 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 SLC38A6Q8IZM9 456 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 FAM185AQ8N0U4 392 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 TMEM185AQ8NFB2 350 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 ZNF486Q96H40 463 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 DNTTIP1Q9H147 329 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 GPR132Q9UNW8 380 aa14.09□□□□□ -0.15
TRAPPC3-209ENST00000616395 HSPA12AO43301 675 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 HLA-AP01891 365 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 CTSDP07339 412 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 AKR1C4P17516 323 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 VAMP1P23763 118 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 FCGR2CP31995 323 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 UCP3P55916 312 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 ATXN7L3Q14CW9 347 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 TMEM95Q3KNT9 176 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 KRBOX4Q5JUW0 171 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 ZNF880Q6PDB4 577 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 Q6ZS46 218 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 LYG2Q86SG7 212 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 SGPP2Q8IWX5 399 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 CD177Q8N6Q3 437 aa14.08□□□□□ -0.16
TRAPPC3-209ENST00000616395 ZNRF1Q8ND25 227 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms