RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 MRPL40Q9NQ50 206 aaKnown RBP3.15□□□□□ -1.91
RFC3-203ENST00000616236 INIPQ9NRY2 104 aa3.15□□□□□ -1.91
RFC3-203ENST00000616236 DHCR7Q9UBM7 475 aaKnown RBP3.15□□□□□ -1.91
RFC3-203ENST00000616236 ANAPC10Q9UM13 185 aa3.15□□□□□ -1.91
RFC3-203ENST00000616236 FIS1Q9Y3D6 152 aa3.15□□□□□ -1.91
RFC3-203ENST00000616236 SMAD5-AS1Q9Y6J3 95 aa3.15□□□□□ -1.91
RFC3-203ENST00000616236 V9GYQ6 96 aa3.15□□□□□ -1.91
RFC3-203ENST00000616236 ATAD5Q96QE3 1844 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 NCOA1Q15788 1441 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 PQLC2LA1A4F0 135 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 OR6C6A6NF89 314 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 INMT-MINDY4F8WBC2 141 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 BHLHE40O14503 412 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 WISP3O95389 354 aaPredicted RBP3.14□□□□□ -1.91
RFC3-203ENST00000616236 MT-CO2P00403 227 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 IGKV1D-33P01593 117 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 IGKV1-33P01594 117 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 IL4P05112 153 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 CD5P06127 495 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 MUC1P15941 1255 aaPredicted RBP3.14□□□□□ -1.91
RFC3-203ENST00000616236 PPP1CCP36873 323 aaKnown RBP3.14□□□□□ -1.91
RFC3-203ENST00000616236 CA7P43166 264 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 RAB14P61106 215 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 RUNX1Q01196 453 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 ZNF616Q08AN1 781 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 FUT5Q11128 374 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 KRR1Q13601 381 aaKnown RBP3.14□□□□□ -1.91
RFC3-203ENST00000616236 APOFQ13790 326 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 CDK10Q15131 360 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 TBPL2Q6SJ96 375 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 LYG2Q86SG7 212 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 SLC35F6Q8N357 371 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 ZNF676Q8N7Q3 588 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 LY6G5BQ8NDX9 201 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 LHFPL5Q8TAF8 219 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 BTF3L4Q96K17 158 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 CMSS1Q9BQ75 279 aaKnown RBP3.14□□□□□ -1.91
RFC3-203ENST00000616236 OR2D2Q9H210 308 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 CMTM6Q9NX76 183 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 CELA1Q9UNI1 258 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 PHLDA3Q9Y5J5 127 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 ITGB4P16144 1822 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 SCN4AP35499 1836 aa3.14□□□□□ -1.91
RFC3-203ENST00000616236 WRNQ14191 1432 aaPredicted RBP eCLIP3.13□□□□□ -1.91
RFC3-203ENST00000616236 A0A1B0GV50 99 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 LINC00862A6NCI5 91 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 C15orf65H3BRN8 121 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 GSTZ1O43708 216 aaPredicted RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 HLA-DQB2P05538 268 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 GUSBP08236 651 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 FGF6P10767 208 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 PSME3P61289 254 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 HIST1H3AP68431 136 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 RPL19P84098 196 aaKnown RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 H3F3AP84243 136 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 SLC25A34Q6PIV7 304 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 C5orf46Q6UWT4 87 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 TMED4Q7Z7H5 227 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 LRP11Q86VZ4 500 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 RTN4IP1Q8WWV3 396 aaPredicted RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 MS4A6EQ96DS6 147 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 PYURFQ96I23 114 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 LINC00477Q96M19 166 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 HOPXQ9BPY8 73 aaPredicted RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 PAQR5Q9NXK6 330 aaPredicted RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 COQ4Q9Y3A0 265 aa3.13□□□□□ -1.91
RFC3-203ENST00000616236 COL2A1P02458 1487 aaPredicted RBP3.13□□□□□ -1.91
RFC3-203ENST00000616236 THADAQ6YHU6 1953 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 ATRXP46100 2492 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 IGLV3-16A0A075B6K0 115 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 A6NED7 52 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 OR4C45A6NMZ5 311 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 ZNF729A6NN14 1252 aaPredicted RBP3.12□□□□□ -1.91
RFC3-203ENST00000616236 OR2B3O76000 313 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 TTRP02766 147 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 ZNF32P17041 273 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 OPRM1P35372 400 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 LPCAT3Q6P1A2 487 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 ST20-AS1Q8NBB2 130 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 OR4X1Q8NH49 305 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 FAM172AQ8WUF8 416 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 KLK6Q92876 244 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 TBX5Q99593 518 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 KIFC1Q9BW19 673 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 ULBP3Q9BZM4 244 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 CXorf21Q9HAI6 301 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 NMNAT1Q9HAN9 279 aaPredicted RBP3.12□□□□□ -1.91
RFC3-203ENST00000616236 ANAPC11Q9NYG5 84 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 IDI2-AS1Q9NZ38 188 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 RPUSD1Q9UJJ7 312 aaKnown RBP3.12□□□□□ -1.91
RFC3-203ENST00000616236 FAM32AQ9Y421 112 aaKnown RBP3.12□□□□□ -1.91
RFC3-203ENST00000616236 ICOSQ9Y6W8 199 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 ZNF532Q9HCE3 1301 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 DHX57Q6P158 1386 aaKnown RBP3.12□□□□□ -1.91
RFC3-203ENST00000616236 DSCAML1Q8TD84 2053 aa3.12□□□□□ -1.91
RFC3-203ENST00000616236 BAZ1BQ9UIG0 1483 aaKnown RBP3.11□□□□□ -1.91
RFC3-203ENST00000616236 IGKV1OR2-108A0A075B7D4 117 aa3.11□□□□□ -1.91
RFC3-203ENST00000616236 C7orf66A4D0T2 115 aa3.11□□□□□ -1.91
RFC3-203ENST00000616236 H0YJX3 145 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms