RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 HOXD4P09016 255 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 AGAP20933 346 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 GUCA2AQ02747 115 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 INSM2Q96T92 566 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 RABAC1Q9UI14 185 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 TRAV30A0A087WSZ9 112 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 TRBV5-3A0A0A0MS03 114 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 ZNF205O95201 554 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 FGF5P12034 268 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 IER5LQ5T953 404 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 MOB3BQ86TA1 216 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 GAGE7O76087 117 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 GAGE12FP0CL80 117 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 GAGE12GP0CL81 117 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 GAGE12IP0CL82 117 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 FUT6P51993 359 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 GNB2P62879 340 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 C17orf67Q0P5P2 114 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 KIAA0040Q15053 153 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 ADAMTSL5Q6ZMM2 481 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 SNRPCP09234 159 aaKnown RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 NTHL1P78549 312 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 SLC25A35Q3KQZ1 300 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 TMEM177Q53S58 311 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 A0A1B0GU03 582 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 CTSDP07339 412 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 PSG2P11465 335 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 HOXD3P31249 432 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 ZNF56Q15929 161 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 TM4SF20Q53R12 229 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 TMEM255BQ8WV15 326 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 CISD1Q9NZ45 108 aaKnown RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 HOXC4P09017 264 aaPredicted RBP8.14□□□□□ -1.11
COL12A1-211ENST00000615798 PCMT1P22061 227 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 MRGPREQ86SM8 312 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 RDH5Q92781 318 aa8.14□□□□□ -1.11
COL12A1-211ENST00000615798 WISP3O95389 354 aaPredicted RBP8.13□□□□□ -1.11
COL12A1-211ENST00000615798 FAM53BQ14153 422 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 C5orf47Q569G3 176 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 GOLT1AQ6ZVE7 132 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 SLC25A42Q86VD7 318 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 OR4C3Q8NH37 302 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PGLYRP3Q96LB9 341 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 FBXL15Q9H469 300 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PLEKHB1Q9UF11 243 aaPredicted RBP8.13□□□□□ -1.11
COL12A1-211ENST00000615798 COX20Q5RI15 118 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 BCDIN3DQ7Z5W3 292 aaKnown RBP8.13□□□□□ -1.11
COL12A1-211ENST00000615798 NPEPL1Q8NDH3 523 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 SPATA25Q9BR10 227 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 TRAV9-1A0A075B6T8 112 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 TMEM170BQ5T4T1 132 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 BTLAQ7Z6A9 289 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 C10orf111Q8N326 155 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 SPXQ9BT56 116 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 ONECUT1Q9UBC0 465 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 TANC2Q9HCD6 1990 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PHLDA3Q9Y5J5 127 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 GRIFINA4D1Z8 144 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 VPREB1P12018 145 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 NXPH1P58417 271 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 FGF13Q92913 245 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 MS4A5Q9H3V2 200 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PRSS47A8MTI9 375 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PLNP26678 52 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 TMEM215Q68D42 235 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 C2orf82Q6UX34 121 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PRDM13Q9H4Q3 707 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 AURKAIP1Q9NWT8 199 aaPredicted RBP8.13□□□□□ -1.11
COL12A1-211ENST00000615798 CLDND1Q9NY35 253 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 ISXQ2M1V0 245 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 PFN4Q8NHR9 129 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 H0YGG7 62 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 CD46P15529 392 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 OLIG3Q7RTU3 272 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 ST8SIA1Q92185 356 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 RRN3P1Q2M238 152 aa8.13□□□□□ -1.11
COL12A1-211ENST00000615798 SS18L1O75177 396 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-211ENST00000615798 APOBEC1P41238 236 aaKnown RBP8.12□□□□□ -1.11
COL12A1-211ENST00000615798 KCNE1BA0A087WTH5 132 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 GAGE12BA1L429 117 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 SUMO3P55854 103 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-211ENST00000615798 RNF182Q8N6D2 247 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 CSF3RQ99062 836 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 ERG28Q9UKR5 140 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 LOC105371242A0A075B767 164 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 PPIAL4CA0A0B4J2A2 164 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 PPIAL4GP0DN37 164 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 PVRP15151 417 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 PRTN3P24158 256 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 MDP1Q86V88 176 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 QTRT1Q9BXR0 403 aaKnown RBP8.12□□□□□ -1.11
COL12A1-211ENST00000615798 TMEM30AQ9NV96 361 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 IL36GQ9NZH8 169 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 AMMECR1Q9Y4X0 333 aaPredicted RBP8.12□□□□□ -1.11
COL12A1-211ENST00000615798 KLK2P20151 261 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 LIM2P55344 173 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 CD300CQ08708 224 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 OR4A5Q8NH83 315 aa8.12□□□□□ -1.11
COL12A1-211ENST00000615798 ERVH48-1M5A8F1 160 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms