RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 OR5B3Q8NH48 314 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 CABLES2Q9BTV7 478 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 TECRQ9NZ01 308 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 MMP24Q9Y5R2 645 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 DOCK8Q8NF50 2099 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 CORTO00230 105 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 RPL8P62917 257 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 MIDNQ504T8 468 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 SAT2Q96F10 170 aaPredicted RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 ARID1AO14497 2285 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 HEATR5BQ9P2D3 2071 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 A0A1B0GTI1 187 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 CHEK1O14757 476 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 SMAD7O15105 426 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 HLA-GP17693 338 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 MEF2CQ06413 473 aaPredicted RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 DYNLRB2Q8TF09 96 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 MRPL37Q9BZE1 423 aaKnown RBP8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 GPR132Q9UNW8 380 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 NOTCH4Q99466 2003 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 SPCS3P61009 180 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 OR4D10Q8NGI6 311 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 PHYHIPLQ96FC7 376 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 WBP1Q96G27 269 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 TMEM222Q9H0R3 208 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 OR51I2Q9H344 312 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 TMEM167BQ9NRX6 74 aa8.03□□□□□ -1.12
CLTCL1-208ENST00000615606 CDKN1AP38936 164 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 CA7P43166 264 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 PRR27Q6MZM9 219 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 SLC24A4Q8NFF2 622 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 C12orf57Q99622 126 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 TM2D1Q9BX74 207 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 PRO3102Q9H379 93 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 CLCF1Q9UBD9 225 aa8.02□□□□□ -1.12
CLTCL1-208ENST00000615606 MFNGO00587 321 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 PGLYRP1O75594 196 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 RHBDL1O75783 438 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 COMPP49747 757 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 PAFAH1B2P68402 229 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 DTX1Q86Y01 620 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 UBE2L3P68036 154 aaKnown RBP8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 RNFT1Q5M7Z0 435 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 ZNF362Q5T0B9 420 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 IGFL3Q6UXB1 125 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 RGP1Q92546 391 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 PQLC2LA1A4F0 135 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 TGOLN2O43493 480 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 TOX4O94842 621 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 HPXP02790 462 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 THBDP07204 575 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 USF1P22415 310 aaPredicted RBP8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 ASPHD2Q6ICH7 369 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 OR4C13Q8NGP0 309 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 BLNKQ8WV28 456 aa8.02□□□□□ -1.13
CLTCL1-208ENST00000615606 ALPK2Q86TB3 2170 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 APELAP0DMC3 54 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 PF4V1P10720 104 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 CTRB1P17538 263 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 B3GALT5-AS1P59052 145 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 EWSR1Q01844 656 aaKnown RBP eCLIP8.01□□□□□ -1.131e-9■■■■■ 35.7
CLTCL1-208ENST00000615606 RNF212Q495C1 297 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 CTRB2Q6GPI1 263 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 TEPPQ6URK8 271 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 UNQ5815/PRO19632Q6UWF5 114 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 DNM1P46Q6ZS02 220 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 RTN4RL2Q86UN3 420 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 PDPNQ86YL7 162 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 OR8I2Q8N0Y5 310 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 FAM216BQ8N7L0 139 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 STXBP6Q8NFX7 210 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 ANGPTL6Q8NI99 470 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 OPN4Q9UHM6 478 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 H0YL77 283 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 MMP9P14780 707 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 LCN2P80188 198 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 H3F3AP84243 136 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 C4orf17Q53FE4 359 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 SIGIRRQ6IA17 410 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 OR2T10Q8NGZ9 312 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 P2RX4Q99571 388 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 WDR61Q9GZS3 305 aaKnown RBP8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 A0A0G2JNJ9 132 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 CCL1P22362 96 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 UCP3P55916 312 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 TMEM255AQ5JRV8 349 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 OR4X1Q8NH49 305 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 TMEM208Q9BTX3 173 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 Q9UFV3 132 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 SLC25A17O43808 307 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 PGA5P0DJD9 388 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 SSTR5P35346 364 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 RCC2Q9P258 522 aaKnown RBP8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 DPM3Q9P2X0 92 aa8.01□□□□□ -1.13
CLTCL1-208ENST00000615606 A0A1W2PPQ1 181 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 RNASEK-C17orf49H0YIS7 233 aa8□□□□□ -1.13
CLTCL1-208ENST00000615606 OR2A4O95047 310 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms