RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SNAI3Q3KNW1 292 aa12.66□□□□□ -0.38
SNPH-203ENST00000614659 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
SNPH-203ENST00000614659 PGLYRP1O75594 196 aaPredicted RBP12.66□□□□□ -0.38
SNPH-203ENST00000614659 CYB5R3P00387 301 aaPredicted RBP12.66□□□□□ -0.38
SNPH-203ENST00000614659 CFDP00746 253 aaPredicted RBP12.66□□□□□ -0.38
SNPH-203ENST00000614659 SPACA3Q8IXA5 215 aa12.66□□□□□ -0.38
SNPH-203ENST00000614659 FADS6Q8N9I5 356 aa12.66□□□□□ -0.38
SNPH-203ENST00000614659 SBF1O95248 1867 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 A0A1W2PP11 408 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 A6NDN8 102 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 TGFBR3LH3BV60 316 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 CD99P14209 185 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 ZP1P60852 638 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 ATP1A1-AS1Q5TC04 95 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 ELOVL1Q9BW60 279 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 MAP1LC3CQ9BXW4 147 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 CXorf65A6NEN9 183 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 FOXH1O75593 365 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 MPZP25189 248 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 FAM3BP58499 235 aaPredicted RBP12.65□□□□□ -0.38
SNPH-203ENST00000614659 OR1L8Q8NGR8 309 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 SRXN1Q9BYN0 137 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 LPAR2Q9HBW0 351 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 IGLV3-12A0A075B6K2 115 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 NTN3O00634 580 aaPredicted RBP12.65□□□□□ -0.38
SNPH-203ENST00000614659 OR2H2O95918 312 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 FAM87AP0C7U9 286 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 OR52L2PQ8NGH6 319 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 NEU4Q8WWR8 484 aaPredicted RBP12.65□□□□□ -0.38
SNPH-203ENST00000614659 INSIG2Q9Y5U4 225 aa12.65□□□□□ -0.38
SNPH-203ENST00000614659 IGLV3-32A0A0A0MS00 114 aa12.65□□□□□ -0.39
SNPH-203ENST00000614659 CAMPP49913 170 aa12.65□□□□□ -0.39
SNPH-203ENST00000614659 SPINK9Q5DT21 86 aa12.65□□□□□ -0.39
SNPH-203ENST00000614659 TIMM23BQ5SRD1 257 aa12.65□□□□□ -0.39
SNPH-203ENST00000614659 PERPQ96FX8 193 aa12.65□□□□□ -0.39
SNPH-203ENST00000614659 SPINK2P20155 84 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 GFRA1P56159 465 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 GUCA2BQ16661 112 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 HIST3H3Q16695 136 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 FLYWCH2Q96CP2 140 aaKnown RBP12.64□□□□□ -0.39
SNPH-203ENST00000614659 ZNF703Q9H7S9 590 aaPredicted RBP12.64□□□□□ -0.39
SNPH-203ENST00000614659 DNASE2O00115 360 aaPredicted RBP12.64□□□□□ -0.39
SNPH-203ENST00000614659 SYNGR3O43761 229 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 TNFSF10P50591 281 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 RND3P61587 244 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 B2MP61769 119 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 COL5A1-AS1Q5SY13 56 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 DANCRP0C864 163 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 MRPL14Q6P1L8 145 aaKnown RBP12.64□□□□□ -0.39
SNPH-203ENST00000614659 UNQ6494/PRO21346Q6UXR6 183 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 LINC00518Q8N0U6 118 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 TIMP4Q99727 224 aa12.64□□□□□ -0.39
SNPH-203ENST00000614659 CHCHD2Q9Y6H1 151 aaPredicted RBP12.64□□□□□ -0.39
SNPH-203ENST00000614659 TCF21O43680 179 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 PAGE4O60829 102 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 CD1BP29016 333 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 AESQ08117 197 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 Q6ZT83 130 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 PUSL1Q8N0Z8 303 aaKnown RBP12.63□□□□□ -0.39
SNPH-203ENST00000614659 ABHD14AQ9BUJ0 271 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 HBZP02008 142 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 GAS1P54826 345 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 ZNF880Q6PDB4 577 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 OR51M1Q9H341 326 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 APOBEC3AP31941 199 aaPredicted RBP12.63□□□□□ -0.39
SNPH-203ENST00000614659 SMIM8Q96KF7 97 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 NPVFQ9HCQ7 196 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 DLL3Q9NYJ7 618 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 ADAM11O75078 769 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 SCTP09683 121 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 S100A4P26447 101 aaKnown RBP12.63□□□□□ -0.39
SNPH-203ENST00000614659 TMEM255AQ5JRV8 349 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
SNPH-203ENST00000614659 PCM1Q15154 2024 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 IGSF23A1L1A6 192 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 TIAF1O95411 115 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 CLDN14O95500 239 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 F12P00748 615 aaPredicted RBP12.62□□□□□ -0.39
SNPH-203ENST00000614659 UNC119Q13432 240 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 PSG5Q15238 335 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 OR4P4Q8NGL7 312 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 OR51B2Q9Y5P1 312 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 CHD5Q8TDI0 1954 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
SNPH-203ENST00000614659 PAFAH1B2P68402 229 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 ZNF714Q96N38 554 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 SRSF10O75494 262 aaKnown RBP12.62□□□□□ -0.39
SNPH-203ENST00000614659 FAM106CPP0CH98 169 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 ASPHD2Q6ICH7 369 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 TBX15Q96SF7 602 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 PLSCR2Q9NRY7 297 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 GREB1Q4ZG55 1949 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 LOC102723996A0A087X1L8 192 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 TNXAQ16473 311 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 LAMTOR1Q6IAA8 161 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 BLNKQ8WV28 456 aa12.62□□□□□ -0.39
SNPH-203ENST00000614659 RNASE6Q93091 150 aaKnown RBP12.62□□□□□ -0.39
SNPH-203ENST00000614659 PAM16Q9Y3D7 125 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms