RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 PDLIM4P50479 330 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 PNRC1Q12796 327 aaPredicted RBP8.44□□□□□ -1.06
GGA3-221ENST00000614198 GABRA6Q16445 453 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 SPIN3Q5JUX0 258 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 Q5PR19 223 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 BTNL3Q6UXE8 466 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 POM121L2Q96KW2 1035 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 HS3ST6Q96QI5 342 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 DHRS3O75911 302 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 FCGR2AP12318 317 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 MMP9P14780 707 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 CTSSP25774 331 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 CCKARP32238 428 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 CDSNQ15517 529 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 TAF9Q16594 264 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 Q6ZT83 130 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 C6orf201Q7Z4U5 140 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 MRPL41Q8IXM3 137 aaKnown RBP8.44□□□□□ -1.06
GGA3-221ENST00000614198 HIST1H2AAQ96QV6 131 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 DIRC2Q96SL1 478 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 CABLES2Q9BTV7 478 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 AKAP6Q13023 2319 aa8.44□□□□□ -1.06
GGA3-221ENST00000614198 A0A0G2JNJ9 132 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 XKRY2A2RUG3 117 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 DHRS7CA6NNS2 312 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 IGLV3-1P01715 115 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 TMEM50BP56557 158 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 IL13RA2Q14627 380 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 C22orf15Q8WYQ4 148 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 ACY3Q96HD9 319 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 WFIKKN1Q96NZ8 548 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 Q9UFV3 132 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 AHRRA9YTQ3 701 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 ST8SIA3O43173 380 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 PHF1O43189 567 aaPredicted RBP8.43□□□□□ -1.06
GGA3-221ENST00000614198 KISS1Q15726 138 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 DOK3Q7L591 496 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 S100A7AQ86SG5 101 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 WDR31Q8NA23 367 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 OR56B2PQ8NGI1 322 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 CLDND2Q8NHS1 167 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 RTN4IP1Q8WWV3 396 aaPredicted RBP8.43□□□□□ -1.06
GGA3-221ENST00000614198 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
GGA3-221ENST00000614198 CRYM-AS1A6NIL9 109 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 WDR1O75083 606 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 SCGB1D1O95968 90 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 ECI1P42126 302 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 RUNX1Q01196 453 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 MRPL49Q13405 166 aaKnown RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 KRTAP27-1Q3LI81 207 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 CALHM1Q8IU99 346 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 RBMXL1Q96E39 390 aaKnown RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 OR2J1Q9GZK6 312 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 HIPK2Q9H2X6 1198 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 RPH3ALQ9UNE2 315 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 TRDCB7Z8K6 153 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 PPP5D1E7EU14 171 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 CTSDP07339 412 aaPredicted RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 ATP6V0CP27449 155 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 LCN15Q6UWW0 184 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 FAM185AQ8N0U4 392 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 FAM57AQ8TBR7 257 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 FAAP24Q9BTP7 215 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 IL36RNQ9UBH0 155 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 RNF24Q9Y225 148 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 CACNA1DQ01668 2161 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 hCG_38984A0A1B0GV85 526 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 ZNF705FA8MVS1 300 aaPredicted RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 H3BP45 60 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 ZNF705DP0CH99 300 aaPredicted RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 ZNF705BP0CI00 300 aaPredicted RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 ZNF728P0DKX0 622 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 CCL1P22362 96 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 ZNF83P51522 516 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 PCBD1P61457 104 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 C1orf185Q5T7R7 199 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 DYRK2Q92630 601 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 C1orf147Q96MC9 270 aaPredicted RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 ZNF488Q96MN9 340 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 PYGO2Q9BRQ0 406 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 RYDENQ9NUL5 291 aaKnown RBP8.42□□□□□ -1.06
GGA3-221ENST00000614198 PROCRQ9UNN8 238 aa8.42□□□□□ -1.06
GGA3-221ENST00000614198 MBD3L4A6NDZ8 208 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 MBD3L3A6NE82 208 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 MBD3L5A6NJ08 208 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 UBE2NP61088 152 aaKnown RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 ZNF266Q14584 549 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 WDR25Q64LD2 544 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 OR52M1Q8NGK5 317 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 MBD3L2Q8NHZ7 208 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 TMEM37Q8WXS4 190 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 C1QTNF5Q9BXJ0 243 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 LPAR2Q9HBW0 351 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 PLSCR4Q9NRQ2 329 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
GGA3-221ENST00000614198 NBPF19A0A087WUL8 3843 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 A0A0U1RQV5 110 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 SSSCA1O60232 199 aa8.41□□□□□ -1.06
GGA3-221ENST00000614198 GRNP28799 593 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms