RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 EDARADDQ8WWZ3 215 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 DGCR14Q96DF8 476 aaKnown RBP6.89□□□□□ -1.31
SNCA-212ENST00000611107 DIRAS2Q96HU8 199 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 ABHD14BQ96IU4 210 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 GINS4Q9BRT9 223 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 MRPL20Q9BYC9 149 aaKnown RBP6.89□□□□□ -1.31
SNCA-212ENST00000611107 WNT10AQ9GZT5 417 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 SCPEP1Q9HB40 452 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 IFT46Q9NQC8 304 aa6.89□□□□□ -1.31
SNCA-212ENST00000611107 IGKV1D-13A0A0B4J2D9 117 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 LINC01548A6NM66 108 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 TXNL1O43396 289 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 LANCL1O43813 399 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 TUSC2O75896 110 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 TPPPO94811 219 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 SNRNP70P08621 437 aaKnown RBP6.88□□□□□ -1.31
SNCA-212ENST00000611107 IGKV1-13P0DP09 117 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 NFYAP23511 347 aaPredicted RBP6.88□□□□□ -1.31
SNCA-212ENST00000611107 TNFSF8P32971 234 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 CEACAM6P40199 344 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 ARPC4P59998 168 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 LSAMPQ13449 338 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 ZNF79Q15937 498 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 FAM71F2Q6NXP2 309 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 TGIF2LXQ8IUE1 241 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 OR4C13Q8NGP0 309 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 OR52I2Q8NH67 350 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 SMIM4Q8WVI0 70 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 CITED2Q99967 270 aaPredicted RBP6.88□□□□□ -1.31
SNCA-212ENST00000611107 SOSTQ9BQB4 213 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 OR2D2Q9H210 308 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 MMP27Q9H306 513 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 RANBP3Q9H6Z4 567 aaPredicted RBP6.88□□□□□ -1.31
SNCA-212ENST00000611107 ABCB10Q9NRK6 738 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 V9GYH0 126 aa6.88□□□□□ -1.31
SNCA-212ENST00000611107 SULT1C2O00338 296 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 RAB29O14966 203 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 PROP1O75360 226 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 GAPDHP04406 335 aaKnown RBP6.87□□□□□ -1.31
SNCA-212ENST00000611107 CTXN2P0C2S0 81 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 RCVRNP35243 200 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 HRH1P35367 487 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 ARHGDIBP52566 201 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 IL18Q14116 193 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 CDK10Q15131 360 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 ZNF660Q6AZW8 331 aaPredicted RBP6.87□□□□□ -1.31
SNCA-212ENST00000611107 C18orf65Q6ZTR6 163 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 CCDC190Q86UF4 302 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 Q8N6K4 173 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 OR5AP2Q8NGF4 316 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 RITA1Q96K30 269 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 SLC25A33Q9BSK2 321 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 NPFFR1Q9GZQ6 430 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 NECAP2Q9NVZ3 263 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 EHFQ9NZC4 300 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 PIPOXQ9P0Z9 390 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 MTFP1Q9UDX5 166 aa6.87□□□□□ -1.31
SNCA-212ENST00000611107 GABARAPH6UMI1 98 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 CTDSPLO15194 276 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 IGKV1D-33P01593 117 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 IGKV1-33P01594 117 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 IGLV2-14P01704 120 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR8U9P0C7N5 309 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR5H8P0DN80 308 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 AADACP22760 399 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 HLA-DMAP28067 261 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 FCGR2CP31995 323 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 BRS3P32247 399 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 GPR12P47775 334 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 RFX2P48378 723 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 LINC00205P59089 165 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 TAS2R46P59540 309 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 ACTBP60709 375 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 DEFA6Q01524 100 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 DYRK1AQ13627 763 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 EBI3Q14213 229 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 HNF4GQ14541 408 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 CNPY1Q3B7I2 92 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 NSUN5P1Q3KNT7 163 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 ABCA11PQ4W5N1 156 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 PYHIN1Q6K0P9 492 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 FAM131AQ6UXB0 335 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 GLDNQ6ZMI3 551 aaPredicted RBP6.86□□□□□ -1.31
SNCA-212ENST00000611107 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 OVCH2Q7RTZ1 564 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 MOB3BQ86TA1 216 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 LYSMD2Q8IV50 215 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR6Q1Q8NGQ2 317 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR5H2Q8NGV7 314 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR8U1Q8NH10 309 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 OR2T6Q8NHC8 308 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 CAPSLQ8WWF8 208 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 TRIM63Q969Q1 353 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 NOL4LQ96MY1 436 aaPredicted RBP6.86□□□□□ -1.31
SNCA-212ENST00000611107 RBM14Q96PK6 669 aaKnown RBP6.86□□□□□ -1.31
SNCA-212ENST00000611107 FXYD6Q9H0Q3 95 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 SDHAF2Q9NX18 166 aa6.86□□□□□ -1.31
SNCA-212ENST00000611107 KLK11Q9UBX7 282 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms