RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ZNF253O75346 499 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 USF1P22415 310 aaPredicted RBP12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 CTSSP25774 331 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 ZNF818PQ6ZRF7 136 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 ELOA3CA0A087WX78 387 aaPredicted RBP12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 PGA5P0DJD9 388 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 UCNP55089 124 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 OR8I2Q8N0Y5 310 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 NHLRC2Q8NBF2 726 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 SMDT1Q9H4I9 107 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 PXMP4Q9Y6I8 212 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 IGHV3-72A0A0B4J1Y9 119 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 NEURL1O76050 574 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 TCTEX1D1Q8N7M0 179 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 LPAR2Q9HBW0 351 aa12.22□□□□□ -0.45
PCDHB16-201ENST00000609684 MFSD2BA6NFX1 497 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 COL8A1P27658 744 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 HOXA6P31267 233 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 IZUMO4Q1ZYL8 232 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 MRPL14Q6P1L8 145 aaKnown RBP12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 FDCSPQ8NFU4 85 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 Q8WTZ3 238 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 IMMP1LQ96LU5 166 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 LINC00470Q9BZP3 86 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 CALYQ9NYX4 217 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 ARHGEF17Q96PE2 2063 aaPredicted RBP12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 LYPD3O95274 346 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 P01737 135 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 ZP1P60852 638 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 VAMP3Q15836 100 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 ZNF788Q6ZQV5 615 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 TMEM187Q14656 261 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 STXBP6Q8NFX7 210 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 FAM222BQ8WU58 562 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 TNFRSF19Q9NS68 423 aa12.21□□□□□ -0.45
PCDHB16-201ENST00000609684 DOCK4Q8N1I0 1966 aa12.21□□□□□ -0.46
PCDHB16-201ENST00000609684 CSN3P07498 182 aa12.21□□□□□ -0.46
PCDHB16-201ENST00000609684 TMEM45BQ96B21 275 aa12.21□□□□□ -0.46
PCDHB16-201ENST00000609684 PCGF1Q9BSM1 259 aa12.21□□□□□ -0.46
PCDHB16-201ENST00000609684 IGLV3-12A0A075B6K2 115 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 FAM74A7A6NL05 159 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 SYNGR3O43761 229 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 GLIPR1P48060 266 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 NHLRC3Q5JS37 347 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 RTN4RQ9BZR6 473 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 SNRPCP09234 159 aaKnown RBP12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 OR10J1P30954 320 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 DOLPP1Q86YN1 238 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 FADS6Q8N9I5 356 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 POC1AQ8NBT0 407 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 OR1L6Q8NGR2 347 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 OR5P3Q8WZ94 311 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 ZNF837Q96EG3 531 aaPredicted RBP12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 SOSTQ9BQB4 213 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 CYB5R3P00387 301 aaPredicted RBP12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 NAT2P11245 290 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 GPR6P46095 362 aaPredicted RBP12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 TMEM183BQ1AE95 376 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 TAF15Q92804 592 aaKnown RBP eCLIP12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 OR4C12Q96R67 309 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 ZNF596Q8TC21 504 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 PACRGQ96M98 296 aaPredicted RBP12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
PCDHB16-201ENST00000609684 A0A087WV48 116 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 UCP3P55916 312 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 NHLH1Q02575 133 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 LDLRAD3Q86YD5 345 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 TRAV34A0A0B4J273 112 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 A0A0B4J293 547 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 UMODP07911 640 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 OR5AL1P0C617 328 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 RPL29P47914 159 aaKnown RBP12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 HLA-DRB5Q30154 266 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 COX19Q49B96 90 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 Q6ZT83 130 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 ZNF883P0CG24 379 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 IER3P46695 156 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 KCNMB1Q16558 191 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 C16orf82Q7Z2V1 217 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 LEAP2Q969E1 77 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 RLFQ13129 1914 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 MARCH11A6NNE9 402 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 F5H697 171 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 MPDU1O75352 247 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 KLK2P20151 261 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 ID4P47928 161 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 ECSCRQ19T08 205 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 TP53RKQ96S44 253 aa12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 CISD1Q9NZ45 108 aaKnown RBP12.19□□□□□ -0.46
PCDHB16-201ENST00000609684 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 S1PR2O95136 353 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 CD8AP01732 235 aa12.18□□□□□ -0.46
PCDHB16-201ENST00000609684 MDKP21741 143 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms