RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CEACAM19Q7Z692 300 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 LFNGQ8NES3 379 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 OR6Q1Q8NGQ2 317 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 FBLIM1Q8WUP2 373 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 FLYWCH2Q96CP2 140 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 RHOVQ96L33 236 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 OR4C12Q96R67 309 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 RNF5Q99942 180 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 HDHD3Q9BSH5 251 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 RIMS4Q9H426 269 aaPredicted RBP10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 OR1A1Q9P1Q5 309 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 METTL1Q9UBP6 276 aaKnown RBP10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 WASHC3Q9Y3C0 194 aa10.31□□□□□ -0.76
POLR2J3-219ENST00000608621 TRBV6-6A0A0A6YYG2 114 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 SLC22A1O15245 554 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 SOCS1O15524 211 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 OR8U9P0C7N5 309 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 ZBTB25P24278 435 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 CD40LGP29965 261 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 LINC00205P59089 165 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 TPPP2P59282 170 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 RPS16P62249 146 aaKnown RBP10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 PITPNAQ00169 270 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 HSD17B12Q53GQ0 312 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 DRAXINQ8NBI3 349 aaPredicted RBP10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 LPAR5Q9H1C0 372 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 ZMAT4Q9H898 229 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 AK3Q9UIJ7 227 aa10.3□□□□□ -0.76
POLR2J3-219ENST00000608621 PTGES3LE9PB15 166 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 HSPA12AO43301 675 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 BPNT1O95861 308 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 CA2P00918 260 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 CDK1P06493 297 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 SCTP09683 121 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 CPEP16870 476 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 HLA-DRB3P79483 266 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 SRSF7Q16629 238 aaKnown RBP eCLIP10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 RNLSQ5VYX0 342 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 MOB1BQ7L9L4 216 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 URM1Q9BTM9 101 aaKnown RBP10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 MND1Q9BWT6 205 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 SLA2Q9H6Q3 261 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 TENM2Q9NT68 2774 aa10.29□□□□□ -0.76
POLR2J3-219ENST00000608621 TRGV3P03979 118 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 TFAP2AP05549 437 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 UCHL1P09936 223 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 TMEM50BP56557 158 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 FXYD3Q14802 87 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 RCN1Q15293 331 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 P2RY14Q15391 338 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 SPHARQ15513 63 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 HAPLN4Q86UW8 402 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 Q8N1Y9 231 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 FAM89BQ8N5H3 189 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 ZNF383Q8NA42 475 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 OR5T1Q8NG75 326 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 OR6M1Q8NGM8 313 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 PTX4Q96A99 478 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 TSNAXQ99598 290 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 ELOVL1Q9BW60 279 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 Q9N2K0 584 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 ZNF355PQ9NSJ1 428 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 ZNF221Q9UK13 617 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 MGAT4AQ9UM21 535 aa10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 LSM2Q9Y333 95 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-219ENST00000608621 ARPC1BO15143 372 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 IGKV1-16P04430 117 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 LYL1P12980 280 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 ARSBP15848 533 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 VEGFCP49767 419 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 MED22Q15528 200 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 OGFRL1Q5TC84 451 aaPredicted RBP10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 TMEM203Q969S6 136 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 GFI1Q99684 422 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 PECRQ9BY49 303 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 PLGRKTQ9HBL7 147 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 RANGRFQ9HD47 186 aaPredicted RBP10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 HSF4Q9ULV5 492 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 AK6Q9Y3D8 172 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 DNAH7Q8WXX0 4024 aa10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 DYNC2H1Q8NCM8 4307 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-219ENST00000608621 IGKV1-6A0A0C4DH72 117 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 FOXI3A8MTJ6 420 aaPredicted RBP10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 SLC17A2O00624 439 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 SLC25A17O43808 307 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 SPDEFO95238 335 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 IGLV1-51P01701 117 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 LIPKQ5VXJ0 399 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 TMEM91Q6ZNR0 172 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 ANKRD13BQ86YJ7 626 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 ARHGAP5-AS1Q96IT6 56 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 CITED4Q96RK1 184 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 CMSS1Q9BQ75 279 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 RSRP1Q9BUV0 290 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 GAR1Q9NY12 217 aaKnown RBP10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 STUB1Q9UNE7 303 aa10.26□□□□□ -0.77
POLR2J3-219ENST00000608621 C13orf42A0A1B0GVH6 325 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms