RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 OR4A47Q6IF82 309 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 PSRC1Q6PGN9 363 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 RASL11AQ6T310 242 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 PARS2Q7L3T8 475 aaKnown RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF695Q8IW36 515 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 CMTM8Q8IZV2 173 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 C10orf53Q8N6V4 93 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR5A2Q8NGI9 324 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR5D13Q8NGL4 314 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR10G8Q8NGN5 311 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR4C3Q8NH37 302 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SGMS2Q8NHU3 365 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC25A40Q8TBP6 338 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 PP6455Q8WZ26 134 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM3CQ92520 227 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 DYRK2Q92630 601 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 RAB1CQ92928 201 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 LHX4Q969G2 390 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 LSM10Q969L4 123 aaKnown RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF48Q96MX3 618 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 WDR61Q9GZS3 305 aaKnown RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 MS4A6AQ9H2W1 248 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZDHHC11Q9H8X9 412 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ST20Q9HBF5 79 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF286AQ9HBT8 521 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC7A10Q9NS82 523 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM38BQ9NVV0 291 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 IL36BQ9NZH7 164 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 PEF1Q9UBV8 284 aaKnown RBP3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 POLR1DQ9Y2S0 133 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 THADAQ6YHU6 1953 aa3.43□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGKV1-9A0A0C4DH69 117 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 LRP5LA4QPB2 252 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SYNDIG1LA6NDD5 238 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A10PA6NDY2 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A18PA6NE21 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A16PA6NEW6 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A20PA6NIJ5 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A8PA6NJQ4 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A7PA6NKC0 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SHISA7A6NL88 538 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 AQP7P3A6NL99 342 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A22PA8MWA6 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A12PA8MX19 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A5PA8MXJ8 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A23PA8MXZ1 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 PHF1O43189 567 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 HCRTR1O43613 425 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 TRAPPC6AO75865 159 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 TUSC2O75896 110 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 WISP2O76076 250 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 CST7O76096 145 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 IL33O95760 270 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGLV2-14P01704 120 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 CISD3P0C7P0 127 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A15PP0C7V4 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A13PP0C7W8 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A14PP0C7W9 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FAM90A24PP0C7X0 464 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 C3orf79P0CE67 100 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 PSG1P11464 419 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 EN2P19622 333 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 TUBG1P23258 451 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 CTGFP29279 349 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 RPS27P42677 84 aaKnown RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR3A4PP47883 348 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 HINT1P49773 126 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SEC11AP67812 179 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 RUNX1Q01196 453 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 ZNF154Q13106 437 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 KLF5Q13887 457 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 NFATC4Q14934 902 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 KIR2DS3Q14952 304 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 CNN3Q15417 329 aaKnown RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 KISS1Q15726 138 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 RAB30Q15771 203 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 IGFBP7Q16270 282 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 C5orf64Q2M2E5 130 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 FFAR4Q5NUL3 377 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 BVES-AS1Q5T3Y7 98 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 PRAMEF20Q5VT98 475 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SAMD13Q5VXD3 122 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 TMEM215Q68D42 235 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 TXNDC8Q6A555 127 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 SLC25A47Q6Q0C1 308 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 LCN15Q6UWW0 184 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 GTF2H5Q6ZYL4 71 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 RTN4RL2Q86UN3 420 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 LRP11Q86VZ4 500 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 BAGE3Q86Y29 109 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 BAGE2Q86Y30 109 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR4N5Q8IXE1 308 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 CA13Q8N1Q1 262 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 RPP25LQ8N5L8 163 aaKnown RBP3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 BCORP1Q8N888 145 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 ST6GALNAC3Q8NDV1 305 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR10G3Q8NGC4 313 aa3.42□□□□□ -1.86
HMGB1P50-201ENST00000605814 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms