RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 KMT2CQ8NEZ4 4911 aaKnown RBP7.06□□□□□ -1.28
TRIM28-214ENST00000600840 IGHV2-26A0A0B4J1V2 119 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 LINC00854A0A1B0GVQ3 168 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ITGB1BP1O14713 200 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 SLC31A2O15432 143 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 PEX14O75381 377 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 TUSC2O75896 110 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 CD74P04233 296 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 CRYBA1P05813 215 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 CSF1P09603 554 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF735P0CB33 412 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ANXA3P12429 323 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 KIR2DS4P43632 304 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 PROK1P58294 105 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ACTBP60709 375 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 CD300CQ08708 224 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 KLF9Q13886 244 aaPredicted RBP7.05□□□□□ -1.28
TRIM28-214ENST00000600840 KIR2DS1Q14954 304 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 TMEM30BQ3MIR4 351 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 KIAA2026Q5HYC2 2103 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF626Q68DY1 528 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 DHRS11Q6UWP2 260 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF782Q6ZMW2 699 aaPredicted RBP7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF767PQ75MW2 155 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 OVCH2Q7RTZ1 564 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ODF3L1Q8IXM7 274 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 H1FOOQ8IZA3 346 aaPredicted RBP7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ABHD12Q8N2K0 398 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 LINC00311Q8N616 119 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 OR5AP2Q8NGF4 316 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ZFAND1Q8TCF1 268 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 SSMEM1Q8WWF3 244 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 CAPSLQ8WWF8 208 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ST6GALNAC6Q969X2 333 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 GALMQ96C23 342 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 GPN1Q9HCN4 374 aaPredicted RBP7.05□□□□□ -1.28
TRIM28-214ENST00000600840 CHMP1AQ9HD42 196 aaPredicted RBP7.05□□□□□ -1.28
TRIM28-214ENST00000600840 KCNIP1Q9NZI2 227 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 ZNRD1Q9P1U0 126 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 JPT1Q9UK76 154 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 RNF114Q9Y508 228 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 RYR3Q15413 4870 aa7.05□□□□□ -1.28
TRIM28-214ENST00000600840 IGHV3-43A0A0B4J1X8 118 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 ANKRD20A5PA0PJZ0 165 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 J3QR06 171 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 M0QZ24 198 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 NPFFO15130 113 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 SPINT2O43291 252 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 RBBP9O75884 186 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 FCER2P06734 321 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 H2AFB2P0C5Z0 115 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 IGHV3-43DP0DP04 118 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 RCVRNP35243 200 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 PPP1CCP36873 323 aaKnown RBP7.04□□□□□ -1.28
TRIM28-214ENST00000600840 MECP2P51608 486 aaKnown RBP7.04□□□□□ -1.28
TRIM28-214ENST00000600840 SLC25A48Q6ZT89 311 aaKnown RBP7.04□□□□□ -1.28
TRIM28-214ENST00000600840 DYNAPQ8N1N2 210 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 TMEM229BQ8NBD8 167 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 BEND2Q8NDZ0 799 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 OR4P4Q8NGL7 312 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 OR9G1Q8NH87 305 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 GIMAP1Q8WWP7 306 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 LEAP2Q969E1 77 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF251Q9BRH9 671 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 GHITMQ9H3K2 345 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 HEXA-AS1Q9H8Q6 139 aa7.04□□□□□ -1.28
TRIM28-214ENST00000600840 A0A0B4J293 547 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 A0A1B0GUS0 222 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 hCG_1809904A0A1W2PP81 198 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 A0A1W2PPE2 198 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 A0A1W2PR64 198 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 A0A1W2PRV1 198 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 SNRPGP15A8MWD9 76 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 G3V4G9 280 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 BUB1B-PAK6H3BSN5 160 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 SDCBPO00560 298 aaPredicted RBP7.03□□□□□ -1.28
TRIM28-214ENST00000600840 IGLV2-14P01704 120 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 IGHV3-7P01780 117 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 CD3DP04234 171 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 IL5P05113 134 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 CTXN2P0C2S0 81 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 BTCP35070 178 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 SAA4P35542 130 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 CEACAM6P40199 344 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 ZNF137PP52743 207 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 LTC4SQ16873 150 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 HLA-DRB5Q30154 266 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 VAX1Q5SQQ9 334 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 NCR3LG1Q68D85 454 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 LHFPL4Q7Z7J7 247 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 LHFPL1Q86WI0 220 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 PRR18Q8N4B5 295 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 OR4D10Q8NGI6 311 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 OR13D1Q8NGV5 346 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 MRGPRFQ96AM1 343 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 CLEC7AQ9BXN2 247 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 MEGF9Q9H1U4 602 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 IFI27L2Q9H2X8 130 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 OR51J1Q9H342 316 aa7.03□□□□□ -1.28
TRIM28-214ENST00000600840 RANGRFQ9HD47 186 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms