RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ASAH1Q13510 395 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 LDLRAD2Q5SZI1 272 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 CCDC144NLQ6NUI1 221 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 LPCAT3Q6P1A2 487 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 LDLRAD3Q86YD5 345 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 OR8H3Q8N146 312 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 ZNF645Q8N7E2 425 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 OR8U1Q8NH10 309 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 S1PR3Q99500 378 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 SLC25A21Q9BQT8 299 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 OCEL1Q9H607 264 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 ZNF221Q9UK13 617 aa9.41□□□□□ -0.9
CHMP2A-207ENST00000600804 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 OR5H14A6NHG9 310 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 VGLL3A8MV65 326 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 ST8SIA5O15466 376 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 LYRM1O43325 122 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 IGLV2-14P01704 120 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 IGHV3-7P01780 117 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 FBP1P09467 338 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 EPHA1P21709 976 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 GPR12P47775 334 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 IFITM3Q01628 133 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 HABP2Q14520 560 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 TPTE2P1Q5T6R2 138 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 LYG1Q8N1E2 194 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 BVESQ8NE79 360 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 OR56B4Q8NH76 319 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 ZFAND2BQ8WV99 257 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 RTN4IP1Q8WWV3 396 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 ZNF486Q96H40 463 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 SCGB3A2Q96PL1 93 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 RSRP1Q9BUV0 290 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 MS4A7Q9GZW8 240 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 FXYD6Q9H0Q3 95 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 OR2D2Q9H210 308 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 ABCB10Q9NRK6 738 aa9.4□□□□□ -0.9
CHMP2A-207ENST00000600804 A0A0A6YYJ9 748 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 A0A1W2PPE3 182 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 HSD17B6O14756 317 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 PROP1O75360 226 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 GAPDHP04406 335 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 GNRHRP30968 328 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 BTCP35070 178 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 RND3P61587 244 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 TAGLNQ01995 201 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 EIF4EBP1Q13541 118 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 FAAP20Q6NZ36 180 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 BRD3OSQ6XYD6 125 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 IDO2Q6ZQW0 420 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 LHFPL4Q7Z7J7 247 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 PDZD9Q8IXQ8 264 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 SLC38A6Q8IZM9 456 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 OR13C8Q8NGS7 320 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 ZFAND1Q8TCF1 268 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 MRGPRFQ96AM1 343 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 RPEQ96AT9 228 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 ABHD14BQ96IU4 210 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 ADTRPQ96IZ2 230 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 ESM1Q9NQ30 184 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 MCUBQ9NWR8 336 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 SDHAF2Q9NX18 166 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 ZNRD1Q9P1U0 126 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 TBC1D24Q9ULP9 559 aa9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 RBM7Q9Y580 266 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-207ENST00000600804 GPR31O00270 319 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 SLC6A1P30531 599 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 ARHGDIBP52566 201 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 DEFA1P59665 94 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 DEFA3P59666 94 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 HILS1P60008 231 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 RBMS2Q15434 407 aaKnown RBP9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 RUSC1-AS1Q66K80 236 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 MZT2BQ6NZ67 158 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 C16orf87Q6PH81 154 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 ZNF66Q6ZN08 573 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 TGIF2LXQ8IUE1 241 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 CMTM1Q8IZ96 169 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 DRAM1Q8N682 238 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 ZDHHC22Q8N966 263 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 SECTM1Q8WVN6 248 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 TOMM40LQ969M1 308 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 HSD17B10Q99714 261 aaKnown RBP9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 SLC5A7Q9GZV3 580 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 COPZ2Q9P299 210 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 RNF150Q9ULK6 438 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 GPR132Q9UNW8 380 aa9.38□□□□□ -0.91
CHMP2A-207ENST00000600804 IGHV3OR16-10A0A075B7F0 116 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 IGHV1-3A0A0C4DH29 117 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 A0A0U1RQK1 487 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 A0A1W2PPI3 338 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 FAM90A9PA6NNJ1 464 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 NDUFB6O95139 128 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 CTSDP07339 412 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 S100GP29377 79 aa9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 DUTP33316 252 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-207ENST00000600804 THBS3P49746 956 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms