RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 AGMATQ9BSE5 352 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 FAM103A1Q9BTL3 118 aaKnown RBP16.24■□□□□ 0.19
PNKP-212ENST00000599454 TM2D1Q9BX74 207 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 CHMP1AQ9HD42 196 aaPredicted RBP16.24■□□□□ 0.19
PNKP-212ENST00000599454 GAB2Q9UQC2 676 aa16.24■□□□□ 0.19
PNKP-212ENST00000599454 H3BUA1 57 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 MYL12BO14950 172 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 TRGV3P03979 118 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 VEGFCP49767 419 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 WNT4P56705 351 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 PSG5Q15238 335 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 MOGAT2Q3SYC2 334 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 GLT8D1Q68CQ7 371 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 KCNG3Q8TAE7 436 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 ABHD14BQ96IU4 210 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 RSRP1Q9BUV0 290 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 MGAT4AQ9UM21 535 aa16.23■□□□□ 0.19
PNKP-212ENST00000599454 TRBV6-6A0A0A6YYG2 114 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 CA2P00918 260 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 C1orf100Q5SVJ3 147 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 SETD6Q8TBK2 473 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 CYGBQ8WWM9 190 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 CLCC1Q96S66 551 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 SPATA25Q9BR10 227 aa16.22■□□□□ 0.19
PNKP-212ENST00000599454 A0A0G2JLM5 398 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 CPEP16870 476 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 ZBTB25P24278 435 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 HTR2CP28335 458 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 OR10K2Q6IF99 312 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 HAPLN4Q86UW8 402 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 PHYHIPQ92561 330 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 PARP12Q9H0J9 701 aaKnown RBP16.21■□□□□ 0.19
PNKP-212ENST00000599454 C8orf4Q9NR00 106 aa16.21■□□□□ 0.19
PNKP-212ENST00000599454 GAR1Q9NY12 217 aaKnown RBP16.21■□□□□ 0.19
PNKP-212ENST00000599454 LYSTQ99698 3801 aa16.21■□□□□ 0.18
PNKP-212ENST00000599454 C13orf42A0A1B0GVH6 325 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 H0Y980 276 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 PDPNQ86YL7 162 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 MS4A15Q8N5U1 240 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 POC5Q8NA72 575 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 PTX4Q96A99 478 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 NICN1Q9BSH3 213 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 C11orf54Q9H0W9 315 aaPredicted RBP16.2■□□□□ 0.18
PNKP-212ENST00000599454 ZNF355PQ9NSJ1 428 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 PLEKHJ1Q9NW61 149 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 CSMD3Q7Z407 3707 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 DNAH1Q9P2D7 4330 aa16.2■□□□□ 0.18
PNKP-212ENST00000599454 ARSBP15848 533 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 CEACAM6P40199 344 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 RPS16P62249 146 aaKnown RBP16.19■□□□□ 0.18
PNKP-212ENST00000599454 HLA-DRB3P79483 266 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 FXYD3Q14802 87 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 ACSM3Q53FZ2 586 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 DHRSXQ8N5I4 330 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 TMEM68Q96MH6 324 aa16.19■□□□□ 0.18
PNKP-212ENST00000599454 TMEM14DPA8MWL7 114 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 BRI3O95415 125 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 BPNT1O95861 308 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 APOA2P02652 100 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 UNC119Q13432 240 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 KLF5Q13887 457 aaPredicted RBP16.18■□□□□ 0.18
PNKP-212ENST00000599454 LRRTM1Q86UE6 522 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 PACRGLQ8N7B6 248 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 NANOGP1Q8N7R0 232 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 OR9G4Q8NGQ1 327 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 GRPEL2Q8TAA5 225 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 OR1A1Q9P1Q5 309 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 PSORS1C1Q9UIG5 152 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 ZNF221Q9UK13 617 aa16.18■□□□□ 0.18
PNKP-212ENST00000599454 IGKV1-16P04430 117 aa16.17■□□□□ 0.18
PNKP-212ENST00000599454 IFNA6P05013 189 aa16.17■□□□□ 0.18
PNKP-212ENST00000599454 QRFPP83859 136 aa16.17■□□□□ 0.18
PNKP-212ENST00000599454 RBM48Q5RL73 367 aaKnown RBP16.17■□□□□ 0.18
PNKP-212ENST00000599454 AHSA2Q719I0 299 aa16.17■□□□□ 0.18
PNKP-212ENST00000599454 DRAXINQ8NBI3 349 aaPredicted RBP16.17■□□□□ 0.18
PNKP-212ENST00000599454 URM1Q9BTM9 101 aaKnown RBP16.17■□□□□ 0.18
PNKP-212ENST00000599454 PLCXD1Q9NUJ7 323 aa16.17■□□□□ 0.18
PNKP-212ENST00000599454 STARD9Q9P2P6 4700 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 SLC25A17O43808 307 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 PROP1O75360 226 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 CD37P11049 281 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 AADACP22760 399 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 HAGHQ16775 308 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 GTSCR1Q86UQ5 136 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 ZNF383Q8NA42 475 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 OR6M1Q8NGM8 313 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 SIGLEC8Q9NYZ4 499 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 AK3Q9UIJ7 227 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 HSF4Q9ULV5 492 aa16.16■□□□□ 0.18
PNKP-212ENST00000599454 CNIH1O95406 144 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 SRMP19623 302 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 INSL4Q14641 139 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 TATDN3Q17R31 274 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 C8orf59Q8N0T1 100 aaPredicted RBP16.15■□□□□ 0.18
PNKP-212ENST00000599454 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.15■□□□□ 0.18
PNKP-212ENST00000599454 OR5T1Q8NG75 326 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 LPAR5Q9H1C0 372 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 Q9N2K0 584 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 C12orf4Q9NQ89 552 aa16.15■□□□□ 0.18
PNKP-212ENST00000599454 A0A0A6YYD4 124 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms