RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 NPIPB6E9PJ23 425 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 UCP2P55851 309 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 FGF12P61328 243 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 OR52M1Q8NGK5 317 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 TPRP12270 2363 aaKnown RBP10.22□□□□□ -0.77
SCN8A-208ENST00000599343 REG1AP05451 166 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 VAX1Q5SQQ9 334 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 MAP1LC3AQ9H492 121 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 PPP1R3EQ9H7J1 279 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 TSPAN2O60636 221 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 HLA-DQB1P01920 261 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 MT-ND6P03923 174 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 GAPDHP04406 335 aaKnown RBP10.22□□□□□ -0.77
SCN8A-208ENST00000599343 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
SCN8A-208ENST00000599343 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 PRF1P14222 555 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 ANOS1P23352 680 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 KLRB1Q12918 225 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 GPR146Q96CH1 333 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 AMELYQ99218 206 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 SRIP30626 198 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 P2RY4P51582 365 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 RND2P52198 227 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 DLX6P56179 175 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 CX3CL1P78423 397 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 UNC119Q13432 240 aa10.22□□□□□ -0.77
SCN8A-208ENST00000599343 TAF15Q92804 592 aaKnown RBP eCLIP10.22□□□□□ -0.77
SCN8A-208ENST00000599343 ALX4Q9H161 411 aaPredicted RBP10.22□□□□□ -0.77
SCN8A-208ENST00000599343 MRPS18AQ9NVS2 196 aaKnown RBP10.22□□□□□ -0.77
SCN8A-208ENST00000599343 PGLYRP1O75594 196 aaPredicted RBP10.21□□□□□ -0.77
SCN8A-208ENST00000599343 C1orf185Q5T7R7 199 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 TMEM171Q8WVE6 324 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 ITLN1Q8WWA0 313 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 MOB4Q9Y3A3 225 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 PHLDA3Q9Y5J5 127 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 COL22A1Q8NFW1 1626 aaPredicted RBP10.21□□□□□ -0.77
SCN8A-208ENST00000599343 ASAH2BP0C7U1 165 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 SELENOHQ8IZQ5 122 aaKnown RBP10.21□□□□□ -0.77
SCN8A-208ENST00000599343 SRSF12Q8WXF0 261 aaKnown RBP10.21□□□□□ -0.77
SCN8A-208ENST00000599343 LEAP2Q969E1 77 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 CBLN4Q9NTU7 201 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 UQCR10Q9UDW1 63 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 DNAJC13O75165 2243 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 MGST3O14880 152 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 RBFOX2O43251 390 aaKnown RBP eCLIP10.21□□□□□ -0.77
SCN8A-208ENST00000599343 TTC32Q5I0X7 151 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 C12orf54Q6X4T0 127 aa10.21□□□□□ -0.77
SCN8A-208ENST00000599343 DSPPQ9NZW4 1301 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 GRIFINA4D1Z8 144 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 FAM181BA6NEQ2 426 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 SMDT1Q9H4I9 107 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 TMEM56-RWDD3S4R434 201 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 RPL8P62917 257 aaKnown RBP10.21□□□□□ -0.78
SCN8A-208ENST00000599343 PMCHL1Q16048 86 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 UNQ5815/PRO19632Q6UWF5 114 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 FAM131CQ96AQ9 280 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 TMEM45BQ96B21 275 aa10.21□□□□□ -0.78
SCN8A-208ENST00000599343 A0A0U1RQV5 110 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 HLA-DQA1P01909 254 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 MEIG1Q5JSS6 88 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 FAM27BQ5VT28 67 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 SLC25A34Q6PIV7 304 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 ZNF430Q9H8G1 570 aaPredicted RBP10.2□□□□□ -0.78
SCN8A-208ENST00000599343 TMEM136Q6ZRR5 245 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 TMEM229AB2RXF0 380 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 PPP1R17O96001 155 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 NAT2P11245 290 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 ZP4Q12836 540 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 MBNL2Q5VZF2 373 aaKnown RBP10.2□□□□□ -0.78
SCN8A-208ENST00000599343 GPR132Q9UNW8 380 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 SF3B6Q9Y3B4 125 aaKnown RBP10.2□□□□□ -0.78
SCN8A-208ENST00000599343 ZG16O60844 167 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 FAM106CPP0CH98 169 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 CRYBB3P26998 211 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 DDTP30046 118 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 FAM74A4Q5TZK3 123 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 FGFRL1Q8N441 504 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 GCSAMQ8N6F7 178 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 DDB2Q92466 427 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 WNT5BQ9H1J7 359 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 CFDP00746 253 aaPredicted RBP10.2□□□□□ -0.78
SCN8A-208ENST00000599343 FSTP19883 344 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 MPV17P39210 176 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 SNAI3Q3KNW1 292 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 MARS2Q96GW9 593 aaKnown RBP10.2□□□□□ -0.78
SCN8A-208ENST00000599343 DDA1Q9BW61 102 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 ITGB4P16144 1822 aa10.2□□□□□ -0.78
SCN8A-208ENST00000599343 DOCK2Q92608 1830 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 SLC25A17O43808 307 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 SCN3AQ9NY46 2000 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 VKORC1L1Q8N0U8 176 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 ZDHHC8Q9ULC8 765 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 LDLRAD4O15165 306 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 MPDU1O75352 247 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 IGHV3-48P01763 117 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 FOLR2P14207 255 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 AGAP20933 346 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 PMS2CLQ68D20 193 aa10.19□□□□□ -0.78
SCN8A-208ENST00000599343 TLNRD1Q9H1K6 362 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms