RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 APOA1P02647 267 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CTXN2P0C2S0 81 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CT45A6P0DMU7 189 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CT45A5P0DMU8 189 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CT45A7P0DMV0 189 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CNTFRP26992 372 aa8.82□□□□□ -1
LIG1-211ENST00000596457 PRSS3P35030 304 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CBX5P45973 191 aa8.82□□□□□ -1
LIG1-211ENST00000596457 F2RL1P55085 397 aa8.82□□□□□ -1
LIG1-211ENST00000596457 LINC00205P59089 165 aa8.82□□□□□ -1
LIG1-211ENST00000596457 EBI3Q14213 229 aa8.82□□□□□ -1
LIG1-211ENST00000596457 PRR31Q5SQ13 230 aa8.82□□□□□ -1
LIG1-211ENST00000596457 FAM131AQ6UXB0 335 aa8.82□□□□□ -1
LIG1-211ENST00000596457 Q6ZS49 121 aa8.82□□□□□ -1
LIG1-211ENST00000596457 HOGA1Q86XE5 327 aa8.82□□□□□ -1
LIG1-211ENST00000596457 H1FOOQ8IZA3 346 aaPredicted RBP8.82□□□□□ -1
LIG1-211ENST00000596457 C5orf56Q8N8D9 126 aa8.82□□□□□ -1
LIG1-211ENST00000596457 ISOC1Q96CN7 298 aa8.82□□□□□ -1
LIG1-211ENST00000596457 CMTM3Q96MX0 182 aa8.82□□□□□ -1
LIG1-211ENST00000596457 RASL11BQ9BPW5 248 aa8.82□□□□□ -1
LIG1-211ENST00000596457 ZNF251Q9BRH9 671 aa8.82□□□□□ -1
LIG1-211ENST00000596457 AGMATQ9BSE5 352 aa8.82□□□□□ -1
LIG1-211ENST00000596457 GHITMQ9H3K2 345 aa8.82□□□□□ -1
LIG1-211ENST00000596457 SERTAD4Q9NUC0 356 aa8.82□□□□□ -1
LIG1-211ENST00000596457 H3BMQ9 156 aa8.81□□□□□ -1
LIG1-211ENST00000596457 AMY1AP04745 511 aa8.81□□□□□ -1
LIG1-211ENST00000596457 AMY2AP04746 511 aa8.81□□□□□ -1
LIG1-211ENST00000596457 LUMP51884 338 aaPredicted RBP8.81□□□□□ -1
LIG1-211ENST00000596457 ACTBP60709 375 aa8.81□□□□□ -1
LIG1-211ENST00000596457 MMDQ15546 238 aa8.81□□□□□ -1
LIG1-211ENST00000596457 FAM71F2Q6NXP2 309 aa8.81□□□□□ -1
LIG1-211ENST00000596457 C11orf88Q6PI97 169 aa8.81□□□□□ -1
LIG1-211ENST00000596457 CENPVQ7Z7K6 275 aaPredicted RBP8.81□□□□□ -1
LIG1-211ENST00000596457 Q8N2B8 174 aa8.81□□□□□ -1
LIG1-211ENST00000596457 Q8N6K4 173 aa8.81□□□□□ -1
LIG1-211ENST00000596457 RITA1Q96K30 269 aa8.81□□□□□ -1
LIG1-211ENST00000596457 TOLLIPQ9H0E2 274 aa8.81□□□□□ -1
LIG1-211ENST00000596457 NECAP2Q9NVZ3 263 aa8.81□□□□□ -1
LIG1-211ENST00000596457 SDHAF2Q9NX18 166 aa8.81□□□□□ -1
LIG1-211ENST00000596457 EXTL2Q9UBQ6 330 aa8.81□□□□□ -1
LIG1-211ENST00000596457 LINC00527Q9UJ94 153 aa8.81□□□□□ -1
LIG1-211ENST00000596457 CEPT1Q9Y6K0 416 aa8.81□□□□□ -1
LIG1-211ENST00000596457 CTDSP2O14595 271 aa8.8□□□□□ -1
LIG1-211ENST00000596457 FGF16O43320 207 aa8.8□□□□□ -1
LIG1-211ENST00000596457 PROP1O75360 226 aa8.8□□□□□ -1
LIG1-211ENST00000596457 TUSC2O75896 110 aa8.8□□□□□ -1
LIG1-211ENST00000596457 DIRAS3O95661 229 aa8.8□□□□□ -1
LIG1-211ENST00000596457 HLA-DQB1P01920 261 aa8.8□□□□□ -1
LIG1-211ENST00000596457 PMP2P02689 132 aa8.8□□□□□ -1
LIG1-211ENST00000596457 FCGR2CP31995 323 aa8.8□□□□□ -1
LIG1-211ENST00000596457 RPS16P62249 146 aaKnown RBP8.8□□□□□ -1
LIG1-211ENST00000596457 PLGLAQ15195 96 aa8.8□□□□□ -1
LIG1-211ENST00000596457 PDLIM3Q53GG5 364 aaPredicted RBP8.8□□□□□ -1
LIG1-211ENST00000596457 SLC35E3Q7Z769 313 aa8.8□□□□□ -1
LIG1-211ENST00000596457 Q8N9W7 124 aa8.8□□□□□ -1
LIG1-211ENST00000596457 ZNF383Q8NA42 475 aa8.8□□□□□ -1
LIG1-211ENST00000596457 DYNC2LI1Q8TCX1 351 aa8.8□□□□□ -1
LIG1-211ENST00000596457 BCL7BQ9BQE9 202 aa8.8□□□□□ -1
LIG1-211ENST00000596457 C6orf62Q9GZU0 229 aaPredicted RBP8.8□□□□□ -1
LIG1-211ENST00000596457 SLC35D1Q9NTN3 355 aa8.8□□□□□ -1
LIG1-211ENST00000596457 KIAA1456Q9P272 454 aa8.8□□□□□ -1
LIG1-211ENST00000596457 WASHC3Q9Y3C0 194 aa8.8□□□□□ -1
LIG1-211ENST00000596457 OR2W1Q9Y3N9 320 aa8.8□□□□□ -1
LIG1-211ENST00000596457 TET2Q6N021 2002 aaPredicted RBP8.8□□□□□ -1
LIG1-211ENST00000596457 OR5H14A6NHG9 310 aa8.79□□□□□ -1
LIG1-211ENST00000596457 LINC01548A6NM66 108 aa8.79□□□□□ -1
LIG1-211ENST00000596457 H0YJW9 148 aa8.79□□□□□ -1
LIG1-211ENST00000596457 APOA2P02652 100 aa8.79□□□□□ -1
LIG1-211ENST00000596457 OR5H8P0DN80 308 aa8.79□□□□□ -1
LIG1-211ENST00000596457 CD28P10747 220 aa8.79□□□□□ -1
LIG1-211ENST00000596457 AADACP22760 399 aa8.79□□□□□ -1
LIG1-211ENST00000596457 HLA-DMAP28067 261 aa8.79□□□□□ -1
LIG1-211ENST00000596457 MC5RP33032 325 aa8.79□□□□□ -1
LIG1-211ENST00000596457 FXYD4P59646 89 aa8.79□□□□□ -1
LIG1-211ENST00000596457 CDK10Q15131 360 aa8.79□□□□□ -1
LIG1-211ENST00000596457 LAX1Q8IWV1 398 aa8.79□□□□□ -1
LIG1-211ENST00000596457 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.79□□□□□ -1
LIG1-211ENST00000596457 BVESQ8NE79 360 aa8.79□□□□□ -1
LIG1-211ENST00000596457 OR5AU1Q8NGC0 362 aa8.79□□□□□ -1
LIG1-211ENST00000596457 OR5AP2Q8NGF4 316 aa8.79□□□□□ -1
LIG1-211ENST00000596457 SECTM1Q8WVN6 248 aa8.79□□□□□ -1
LIG1-211ENST00000596457 SNAPC3Q92966 411 aa8.79□□□□□ -1
LIG1-211ENST00000596457 C5orf30Q96GV9 206 aa8.79□□□□□ -1
LIG1-211ENST00000596457 NOL4LQ96MY1 436 aaPredicted RBP8.79□□□□□ -1
LIG1-211ENST00000596457 CLCC1Q96S66 551 aa8.79□□□□□ -1
LIG1-211ENST00000596457 CITED1Q99966 193 aa8.79□□□□□ -1
LIG1-211ENST00000596457 MIXL1Q9H2W2 232 aa8.79□□□□□ -1
LIG1-211ENST00000596457 PLSCR3Q9NRY6 295 aa8.79□□□□□ -1
LIG1-211ENST00000596457 EHFQ9NZC4 300 aa8.79□□□□□ -1
LIG1-211ENST00000596457 CCDC59Q9P031 241 aaKnown RBP8.79□□□□□ -1
LIG1-211ENST00000596457 ADAM30Q9UKF2 790 aa8.79□□□□□ -1
LIG1-211ENST00000596457 IGKV1D-13A0A0B4J2D9 117 aa8.78□□□□□ -1
LIG1-211ENST00000596457 NBR2O15453 112 aa8.78□□□□□ -1
LIG1-211ENST00000596457 FBXO24O75426 580 aa8.78□□□□□ -1
LIG1-211ENST00000596457 IGKV1-13P0DP09 117 aa8.78□□□□□ -1
LIG1-211ENST00000596457 RFX2P48378 723 aa8.78□□□□□ -1
LIG1-211ENST00000596457 CBX3Q13185 183 aa8.78□□□□□ -1
LIG1-211ENST00000596457 NSUN5P1Q3KNT7 163 aa8.78□□□□□ -1
LIG1-211ENST00000596457 C10orf99Q6UWK7 81 aa8.78□□□□□ -1
LIG1-211ENST00000596457 ZNF645Q8N7E2 425 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms