RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, human

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-222	ENST00000596378	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	SRRM5	B3KS81	715 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	KLK10	O43240	276 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	SPRY3	O43610	288 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	EIF3G	O75821	320 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	IGHV3-13	P01766	116 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	IGHV3-7	P01780	117 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	ARG1	P05089	322 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	RAB13	P51153	203 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	RPS16	P62249	146 aa	Known RBP	18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	HIST1H2BA	Q96A08	127 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378	OR4C12	Q96R67	309 aa		18.92	■□□□□ 0.62
SRRM1-222	ENST00000596378		A0A1W2PPH5	198 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	BTBD17	A6NE02	478 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	ATXN7	O15265	892 aa	Predicted RBP	18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	SPINK9	Q5DT21	86 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	TIMM23B	Q5SRD1	257 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	FAM201A	Q5SY85	155 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	C1orf185	Q5T7R7	199 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	FAM180A	Q6UWF9	173 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	C22orf34	Q6ZV56	151 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	SSX7	Q7RTT5	188 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	FAM169B	Q8N8A8	192 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	C15orf54	Q8N8G6	183 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	ZNRF1	Q8ND25	227 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	COA4	Q9NYJ1	87 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	HSPB7	Q9UBY9	170 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	DMXL2	Q8TDJ6	3036 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	UBE2L5P	A0A1B0GUS4	154 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	SRP19	P09132	144 aa	Known RBP	18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	HBG1	P69891	147 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	HBG2	P69892	147 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	RTP5	Q14D33	572 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	CLDND2	Q8NHS1	167 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	ZDHHC16	Q969W1	377 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378	AGMAT	Q9BSE5	352 aa		18.91	■□□□□ 0.62
SRRM1-222	ENST00000596378		A0A1W2PPE2	198 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	SCAF4	O95104	1147 aa	Known RBP	18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	CRYAA	P02489	173 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	CD55	P08174	381 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	ZNF726P1	Q15940	193 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	LRRC75B	Q2VPJ9	315 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	LRRC30	A6NM36	301 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	SPINT2	O43291	252 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	SLC38A11	Q08AI6	406 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	CYB561D1	Q8N8Q1	229 aa		18.9	■□□□□ 0.62
SRRM1-222	ENST00000596378	FAM90A26	D6RGX4	464 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	FGF8	P55075	233 aa	Predicted RBP	18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	KLF3	P57682	345 aa	Predicted RBP	18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	MZT1	Q08AG7	82 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	LCN15	Q6UWW0	184 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZG16	O60844	167 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	ELL	P55199	621 aa	Predicted RBP	18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	MSMO1	Q15800	293 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	TMEM14EP	Q6UXP3	125 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	DPPA3	Q6W0C5	159 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	C1orf174	Q8IYL3	243 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	ITLN1	Q8WWA0	313 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	MEGF10	Q96KG7	1140 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	WDR61	Q9GZS3	305 aa	Known RBP	18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	SPTBN2	O15020	2390 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	GVINP1	Q7Z2Y8	2422 aa		18.89	■□□□□ 0.61
SRRM1-222	ENST00000596378	PPIH	O43447	177 aa	Known RBP	18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	NDUFA2	O43678	99 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	SELL	P14151	372 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	EIF2S3	P41091	472 aa	Known RBP	18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	FAM27E3	Q08E93	113 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF506	Q5JVG8	444 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	MUCL1	Q96DR8	90 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	SMDT1	Q9H4I9	107 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	GNG13	Q9P2W3	67 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	PLCE1	Q9P212	2302 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	DCHS1	Q96JQ0	3298 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	PROP1	O75360	226 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	EDDM3B	P56851	147 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	NKX6-1	P78426	367 aa	Predicted RBP	18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	UTF1	Q5T230	341 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	NCR3LG1	Q68D85	454 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	KDF1	Q8NAX2	398 aa	Predicted RBP	18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	GNG12	Q9UBI6	72 aa		18.88	■□□□□ 0.61
SRRM1-222	ENST00000596378	RBMXL2	O75526	392 aa	Known RBP	18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	CLDN14	O95500	239 aa		18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	PAX6	P26367	422 aa		18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	HABP2	Q14520	560 aa	Predicted RBP	18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	RHEB	Q15382	184 aa		18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	SNIP1	Q8TAD8	396 aa	Known RBP	18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	RBMXL1	Q96E39	390 aa	Known RBP	18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	FAM234A	Q9H0X4	552 aa		18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	ZNF665	Q9H7R5	613 aa		18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	DSCAM	O60469	2012 aa		18.87	■□□□□ 0.61
SRRM1-222	ENST00000596378	hCG_1809904	A0A1W2PP81	198 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378		A0A1W2PR64	198 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378		A0A1W2PRV1	198 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378		H3BQ15	152 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	HBE1	P02100	147 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	BMP5	P22003	454 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	GLRX	P35754	106 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	HTD2	P86397	168 aa		18.86	■□□□□ 0.61
SRRM1-222	ENST00000596378	H2BFWT	Q7Z2G1	175 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms