RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 CT45A5P0DMU8 189 aa20.53■□□□□ 0.88
TRIM28-204ENST00000594806 CT45A7P0DMV0 189 aa20.53■□□□□ 0.88
TRIM28-204ENST00000594806 OR2D2Q9H210 308 aa20.53■□□□□ 0.88
TRIM28-204ENST00000594806 RGS5O15539 181 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 AMY1AP04745 511 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 AMY2AP04746 511 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 NAT1P18440 290 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 ARSJQ5FYB0 599 aaPredicted RBP20.52■□□□□ 0.88
TRIM28-204ENST00000594806 C5orf56Q8N8D9 126 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 OR5AP2Q8NGF4 316 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 OR5AN1Q8NGI8 311 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 GPX8Q8TED1 209 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 RBM38Q9H0Z9 239 aaKnown RBP20.52■□□□□ 0.88
TRIM28-204ENST00000594806 RABL2AQ9UBK7 228 aaPredicted RBP20.52■□□□□ 0.88
TRIM28-204ENST00000594806 EXTL2Q9UBQ6 330 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 RSL24D1Q9UHA3 163 aaKnown RBP20.52■□□□□ 0.88
TRIM28-204ENST00000594806 RABL2BQ9UNT1 228 aa20.52■□□□□ 0.88
TRIM28-204ENST00000594806 PROP1O75360 226 aa20.51■□□□□ 0.87
TRIM28-204ENST00000594806 LUMP51884 338 aaPredicted RBP20.51■□□□□ 0.87
TRIM28-204ENST00000594806 ABCA11PQ4W5N1 156 aa20.51■□□□□ 0.87
TRIM28-204ENST00000594806 RNF5Q99942 180 aa20.51■□□□□ 0.87
TRIM28-204ENST00000594806 HAX1O00165 279 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 RBBP9O75884 186 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 TUSC2O75896 110 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 NFYAP23511 347 aaPredicted RBP20.5■□□□□ 0.87
TRIM28-204ENST00000594806 TAS2R46P59540 309 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 TAGLNQ01995 201 aaKnown RBP20.5■□□□□ 0.87
TRIM28-204ENST00000594806 SNAPC3Q92966 411 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 SLIRPQ9GZT3 109 aaKnown RBP20.5■□□□□ 0.87
TRIM28-204ENST00000594806 PLSCR3Q9NRY6 295 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 SERTAD4Q9NUC0 356 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 LIN7CQ9NUP9 197 aaKnown RBP20.5■□□□□ 0.87
TRIM28-204ENST00000594806 SDHAF2Q9NX18 166 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 SIGLEC9Q9Y336 463 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 WASHC3Q9Y3C0 194 aa20.5■□□□□ 0.87
TRIM28-204ENST00000594806 TENM1Q9UKZ4 2725 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 MEIS3P1A6NDR6 274 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 NCBP2LA6PVI3 153 aaKnown RBP20.49■□□□□ 0.87
TRIM28-204ENST00000594806 H0YJW9 148 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 CTDSP2O14595 271 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 OR5H8P0DN80 308 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 VDAC2P45880 294 aaPredicted RBP20.49■□□□□ 0.87
TRIM28-204ENST00000594806 CDK10Q15131 360 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 SNX29P2Q8IUI4 249 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 ADTRPQ96IZ2 230 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 MIXL1Q9H2W2 232 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 NDUFA13Q9P0J0 144 aa20.49■□□□□ 0.87
TRIM28-204ENST00000594806 M0R1X1 148 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 PEX14O75381 377 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 ACTBP60709 375 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 FAM131AQ6UXB0 335 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 Q6ZS46 218 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 ZNF645Q8N7E2 425 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 Q8N9W7 124 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 GIMAP1Q8WWP7 306 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 CITED1Q99966 193 aa20.48■□□□□ 0.87
TRIM28-204ENST00000594806 NXF2Q9GZY0 626 aaKnown RBP20.48■□□□□ 0.87
TRIM28-204ENST00000594806 APOA2P02652 100 aa20.47■□□□□ 0.87
TRIM28-204ENST00000594806 FCGR2CP31995 323 aa20.47■□□□□ 0.87
TRIM28-204ENST00000594806 LAX1Q8IWV1 398 aa20.47■□□□□ 0.87
TRIM28-204ENST00000594806 RASL11BQ9BPW5 248 aa20.47■□□□□ 0.87
TRIM28-204ENST00000594806 WNT10AQ9GZT5 417 aa20.47■□□□□ 0.87
TRIM28-204ENST00000594806 H7C2Y5 167 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 RCVRNP35243 200 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 THBS3P49746 956 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 MMDQ15546 238 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 MSMO1Q15800 293 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 GLDNQ6ZMI3 551 aaPredicted RBP20.46■□□□□ 0.87
TRIM28-204ENST00000594806 PDPNQ86YL7 162 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 KLHDC1Q8N7A1 406 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 ZNF383Q8NA42 475 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 NPBQ8NG41 125 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 MCFD2Q8NI22 146 aa20.46■□□□□ 0.87
TRIM28-204ENST00000594806 C6orf62Q9GZU0 229 aaPredicted RBP20.46■□□□□ 0.87
TRIM28-204ENST00000594806 F2RL1P55085 397 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 MRPS10P82664 201 aaKnown RBP20.45■□□□□ 0.86
TRIM28-204ENST00000594806 C9orf152Q5JTZ5 239 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 DHRS11Q6UWP2 260 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 OVCH2Q7RTZ1 564 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 FAM71E2Q8N5Q1 922 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 DRAXINQ8NBI3 349 aaPredicted RBP20.45■□□□□ 0.86
TRIM28-204ENST00000594806 OR5H2Q8NGV7 314 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 DIRAS2Q96HU8 199 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 A3GALT2U3KPV4 340 aa20.45■□□□□ 0.86
TRIM28-204ENST00000594806 NBR2O15453 112 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 IGHG2P01859 326 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 FCER2P06734 321 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 RRASP10301 218 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 CBX3Q13185 183 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 DYRK1AQ13627 763 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 ABHD1Q96SE0 405 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 EHFQ9NZC4 300 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 KIAA1456Q9P272 454 aa20.44■□□□□ 0.86
TRIM28-204ENST00000594806 KCNAB3O43448 404 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 NDUFA3O95167 84 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 PPYP01298 95 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 VSIG10L2P0DP72 767 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 PYHIN1Q6K0P9 492 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 LYSMD2Q8IV50 215 aa20.43■□□□□ 0.86
TRIM28-204ENST00000594806 ZBTB34Q8NCN2 500 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms