RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CYYR1Q96J86 154 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 TSNAXQ99598 290 aaKnown RBP14.6□□□□□ -0.07
CCDC43-205ENST00000592333 C11orf54Q9H0W9 315 aaPredicted RBP14.6□□□□□ -0.07
CCDC43-205ENST00000592333 FBXL15Q9H469 300 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 TPRKBQ9Y3C4 175 aa14.6□□□□□ -0.07
CCDC43-205ENST00000592333 A0A0A6YYD4 124 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 FOXI3A8MTJ6 420 aaPredicted RBP14.59□□□□□ -0.07
CCDC43-205ENST00000592333 HSPA12AO43301 675 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 SOX15O60248 233 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 DIRAS3O95661 229 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 HSPB1P04792 205 aaKnown RBP14.59□□□□□ -0.07
CCDC43-205ENST00000592333 TFAP2AP05549 437 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 OR8U9P0C7N5 309 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 EGR2P11161 476 aaPredicted RBP14.59□□□□□ -0.07
CCDC43-205ENST00000592333 SERPINB10P48595 397 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 NDPQ00604 133 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 ECSCRQ19T08 205 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 ACSM6Q6P461 480 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 PDPNQ86YL7 162 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 OR6Q1Q8NGQ2 317 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 SETD6Q8TBK2 473 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 PLGRKTQ9HBL7 147 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 Q9N2K0 584 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 AK3Q9UIJ7 227 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 GAB2Q9UQC2 676 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 FBXO7Q9Y3I1 522 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 SORL1Q92673 2214 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 STAB2Q8WWQ8 2551 aa14.59□□□□□ -0.07
CCDC43-205ENST00000592333 SOCS1O15524 211 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 ACTBL2Q562R1 376 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 LIPKQ5VXJ0 399 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 PPP1R27Q86WC6 154 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 OR56B1Q8NGI3 324 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 DLX4Q92988 240 aaPredicted RBP14.58□□□□□ -0.08
CCDC43-205ENST00000592333 ABHD14BQ96IU4 210 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 TMEM68Q96MH6 324 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 OR5B12Q96R08 314 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 CENPOQ9BU64 300 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 DUSP21Q9H596 190 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 ZNF221Q9UK13 617 aa14.58□□□□□ -0.08
CCDC43-205ENST00000592333 H3BUA1 57 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 FCN1O00602 326 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 PROP1O75360 226 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 SAP30O75446 220 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 LY86O95711 162 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 CPEP16870 476 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 TMEM50BP56557 158 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 TAGLNQ01995 201 aaKnown RBP14.57□□□□□ -0.08
CCDC43-205ENST00000592333 PSG5Q15238 335 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 UNQ5815/PRO19632Q6UWF5 114 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 TMEM91Q6ZNR0 172 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 RHOVQ96L33 236 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 KRTAP3-3Q9BYR6 98 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 KRTAP3-2Q9BYR7 98 aa14.57□□□□□ -0.08
CCDC43-205ENST00000592333 METTL1Q9UBP6 276 aaKnown RBP14.57□□□□□ -0.08
CCDC43-205ENST00000592333 BRI3O95415 125 aa14.56□□□□□ -0.08
CCDC43-205ENST00000592333 APOA2P02652 100 aa14.56□□□□□ -0.08
CCDC43-205ENST00000592333 MLLT11Q13015 90 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-205ENST00000592333 RAB11BQ15907 218 aa14.56□□□□□ -0.08
CCDC43-205ENST00000592333 MOGAT2Q3SYC2 334 aa14.56□□□□□ -0.08
CCDC43-205ENST00000592333 GLDNQ6ZMI3 551 aaPredicted RBP14.56□□□□□ -0.08
CCDC43-205ENST00000592333 CMSS1Q9BQ75 279 aaKnown RBP14.56□□□□□ -0.08
CCDC43-205ENST00000592333 ACOT13Q9NPJ3 140 aa14.56□□□□□ -0.08
CCDC43-205ENST00000592333 TRDCB7Z8K6 153 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 SCTP09683 121 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 LGALS7P47929 136 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 P2RY14Q15391 338 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 LFNGQ8NES3 379 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 OR4A4PQ8NGN8 299 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 ABHD5Q8WTS1 349 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 TMEM203Q969S6 136 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 ARHGAP5-AS1Q96IT6 56 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 GFI1Q99684 422 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 ELOVL1Q9BW60 279 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 PECRQ9BY49 303 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 PARP12Q9H0J9 701 aaKnown RBP14.55□□□□□ -0.08
CCDC43-205ENST00000592333 KCNK15Q9H427 330 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 OR1A1Q9P1Q5 309 aa14.55□□□□□ -0.08
CCDC43-205ENST00000592333 IGHV4OR15-8A0A075B7B6 117 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 A0A087WW49 117 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 A0A0G2JLM5 398 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 RGS10O43665 173 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 CA2P00918 260 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 IGKV1-16P04430 117 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 GP9P14770 177 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 VEGFCP49767 419 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 SLURP1P55000 103 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 RPS16P62249 146 aaKnown RBP14.54□□□□□ -0.08
CCDC43-205ENST00000592333 PITPNAQ00169 270 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 ZNF383Q8NA42 475 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 ARPC1AQ92747 370 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 FAM3DQ96BQ1 224 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 OR4C12Q96R67 309 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 HDHD3Q9BSH5 251 aaPredicted RBP14.54□□□□□ -0.08
CCDC43-205ENST00000592333 ALX4Q9H161 411 aaPredicted RBP14.54□□□□□ -0.08
CCDC43-205ENST00000592333 RDH8Q9NYR8 311 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 RAB22AQ9UL26 194 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 AK6Q9Y3D8 172 aaKnown RBP14.54□□□□□ -0.08
CCDC43-205ENST00000592333 V9GY05 133 aa14.54□□□□□ -0.08
CCDC43-205ENST00000592333 LDLRAD4O15165 306 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms