RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 C12orf77C9JDV5 145 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 H0YL77 283 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 H3BQ15 152 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 PSPNO60542 156 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 RBMXL2O75526 392 aaKnown RBP6.21□□□□□ -1.42
ZNF540-206ENST00000589117 CLDN1O95832 211 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 IGKV1-5P01602 117 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 HBZP02008 142 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 IAPPP10997 89 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 SPINK2P20155 84 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 RAB5AP20339 215 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 MPV17P39210 176 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 AKR1C3P42330 323 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 CEBPGP53567 150 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 RUNX1Q01196 453 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 TNFRSF9Q07011 255 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 AESQ08117 197 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 PNRC1Q12796 327 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-206ENST00000589117 LRRC75BQ2VPJ9 315 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 SPSB3Q6PJ21 355 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 Q6ZRM9 215 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 C1orf122Q6ZSJ8 110 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 H2BFWTQ7Z2G1 175 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 SLC35E3Q7Z769 313 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF429Q86V71 674 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 MYPOPQ86VE0 399 aaPredicted RBP6.21□□□□□ -1.42
ZNF540-206ENST00000589117 FAM90A1Q86YD7 464 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 DEFB124Q8NES8 71 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 TCTEX1D2Q8WW35 142 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 TVP23CQ96ET8 276 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 TAAR6Q96RI8 345 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 TCEAL7Q9BRU2 100 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 C20orf24Q9BUV8 137 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 SIRT7Q9NRC8 400 aa6.21□□□□□ -1.42
ZNF540-206ENST00000589117 MED13Q9UHV7 2174 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 FREM2Q5SZK8 3169 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 MED19A0JLT2 244 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 OR5H1A6NKK0 313 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 C1QTNF9BB2RNN3 333 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 AGFG2O95081 481 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 CLDN14O95500 239 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 KRASP01116 189 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 IGKV1-39P01597 117 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 IGLV1-44P01699 117 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 IGKV1D-39P04432 117 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 S100A8P05109 93 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 CECR9P0C854 216 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 RPL35P42766 123 aaKnown RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 SELENOVP59797 346 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 RPP30P78346 268 aaKnown RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 CCL20P78556 96 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 HTD2P86397 168 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 PAX5Q02548 391 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ALKBH6Q3KRA9 238 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 WDR82Q6UXN9 313 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 BHLHA15Q7RTS1 189 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF709Q8N972 641 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 C9orf106Q8NAJ2 232 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 OR10P1Q8NGE3 313 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 CLDND2Q8NHS1 167 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 P2RX4Q99571 388 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ASCL3Q9NQ33 180 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 HSPB7Q9UBY9 170 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 TIMM9Q9Y5J7 89 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 IGHV3-64DA0A0J9YX35 117 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 LRRC30A6NM36 301 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 MLNRO43193 412 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 SRP19P09132 144 aaKnown RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 SLC38A11Q08AI6 406 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 DEFB109BQ30KR1 87 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 TMEM41BQ5BJD5 291 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF787Q6DD87 383 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 VWA1Q6PCB0 445 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 MRGPRGQ86SM5 289 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ODF3L1Q8IXM7 274 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ZFP82Q8N141 532 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 FAM24BQ8N5W8 94 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF525Q8N782 197 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 OR1L1Q8NH94 360 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 C2CD4CQ8TF44 421 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 MBD3L1Q8WWY6 194 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 MUCL1Q96DR8 90 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 MALSU1Q96EH3 234 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ABHD14AQ9BUJ0 271 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 SEBOXQ9HB31 216 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 ZNF71Q9NQZ8 489 aaPredicted RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 SLC39A9Q9NUM3 307 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 UFSP2Q9NUQ7 469 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 CISD1Q9NZ45 108 aaKnown RBP6.2□□□□□ -1.42
ZNF540-206ENST00000589117 GNG13Q9P2W3 67 aa6.2□□□□□ -1.42
ZNF540-206ENST00000589117 IGHV2OR16-5A0A0B4J2B6 119 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 RAB29O14966 203 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 SOX15O60248 233 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 CRYAAP02489 173 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 AGAP20933 346 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 PRDX2P32119 198 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 MAS1LP35410 378 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 COL10A1Q03692 680 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 ICAM4Q14773 271 aa6.19□□□□□ -1.42
ZNF540-206ENST00000589117 IZUMO4Q1ZYL8 232 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms