RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ABHD5Q8WTS1 349 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 GGHQ92820 318 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 RNF5Q99942 180 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 TM2D1Q9BX74 207 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 ABRACLQ9P1F3 81 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 METTL1Q9UBP6 276 aaKnown RBP14.07□□□□□ -0.16
CCDC43-204ENST00000588687 RNF150Q9ULK6 438 aa14.07□□□□□ -0.16
CCDC43-204ENST00000588687 CELP19835 753 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 MC5RP33032 325 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 QRFPP83859 136 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 ST3GAL4Q11206 333 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 LRRTM1Q86UE6 522 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 ZNF555Q8NEP9 628 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 OR1A1Q9P1Q5 309 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 FRAS1Q86XX4 4008 aa14.06□□□□□ -0.16
CCDC43-204ENST00000588687 TRBV6-6A0A0A6YYG2 114 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 SPDEFO95238 335 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 TRGV3P03979 118 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 UBBP0CG47 229 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 LINC00205P59089 165 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 C1orf100Q5SVJ3 147 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 MOB1BQ7L9L4 216 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 SGPP2Q8IWX5 399 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 ZNF383Q8NA42 475 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 POC5Q8NA72 575 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 NEDD4LQ96PU5 975 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 CLCC1Q96S66 551 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 RSRP1Q9BUV0 290 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 ELOVL1Q9BW60 279 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 TMEM59Q9BXS4 323 aa14.05□□□□□ -0.16
CCDC43-204ENST00000588687 EFCAB10A6NFE3 127 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 TMEM14DPA8MWL7 114 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 H7C2Y5 167 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 GSTP1P09211 210 aaKnown RBP14.04□□□□□ -0.16
CCDC43-204ENST00000588687 CD37P11049 281 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 MAPK3P27361 379 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-204ENST00000588687 MED21Q13503 144 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 KLF5Q13887 457 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-204ENST00000588687 HAGHQ16775 308 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 ANKRD13BQ86YJ7 626 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 DRAXINQ8NBI3 349 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-204ENST00000588687 THRSPQ92748 146 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 SPATA25Q9BR10 227 aa14.04□□□□□ -0.16
CCDC43-204ENST00000588687 HDHD3Q9BSH5 251 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-204ENST00000588687 C11orf54Q9H0W9 315 aaPredicted RBP14.04□□□□□ -0.16
CCDC43-204ENST00000588687 FOXI3A8MTJ6 420 aaPredicted RBP14.03□□□□□ -0.16
CCDC43-204ENST00000588687 H3BUA1 57 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 SLC22A1O15245 554 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 ZP3P21754 424 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 WNT4P56705 351 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 HLA-DRB3P79483 266 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 OR9G4Q8NGQ1 327 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 GRPEL2Q8TAA5 225 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 PTX4Q96A99 478 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 RANGRFQ9HD47 186 aaPredicted RBP14.03□□□□□ -0.16
CCDC43-204ENST00000588687 ADAM30Q9UKF2 790 aa14.03□□□□□ -0.16
CCDC43-204ENST00000588687 IGKV1-6A0A0C4DH72 117 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 BRI3O95415 125 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 IGLV2-23P01705 113 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 ARSBP15848 533 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 DEFA5Q01523 94 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 PSORS1C1Q9UIG5 152 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 AK3Q9UIJ7 227 aa14.02□□□□□ -0.17
CCDC43-204ENST00000588687 SLC25A17O43808 307 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 RBMXL2O75526 392 aaKnown RBP14.01□□□□□ -0.17
CCDC43-204ENST00000588687 TRBV12-3P01733 135 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 CRYGBP07316 175 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 CPEP16870 476 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 PJVKQ0ZLH3 352 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 FXYD3Q14802 87 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 PDPNQ86YL7 162 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 C10orf67Q8IYJ2 551 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 KCNG3Q8TAE7 436 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 FBLIM1Q8WUP2 373 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 CYGBQ8WWM9 190 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 EDARADDQ8WWZ3 215 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 PHYHIPQ92561 330 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 TSNAXQ99598 290 aaKnown RBP14.01□□□□□ -0.17
CCDC43-204ENST00000588687 LPAR5Q9H1C0 372 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 CHMP1AQ9HD42 196 aaPredicted RBP14.01□□□□□ -0.17
CCDC43-204ENST00000588687 FKBP14Q9NWM8 211 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 SIGLEC8Q9NYZ4 499 aa14.01□□□□□ -0.17
CCDC43-204ENST00000588687 IZUMO1RA6ND01 250 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 MYL12BO14950 172 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 GNAO1P09471 354 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 SCTP09683 121 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 ZBTB25P24278 435 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 CD40LGP29965 261 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 SYNJ2BPP57105 145 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 DYRK1AQ13627 763 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 MRGPRG-AS1Q2M3A8 158 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 MOGAT2Q3SYC2 334 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 TTC23Q5W5X9 447 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 LINC00322Q6ZN03 302 aaPredicted RBP14□□□□□ -0.17
CCDC43-204ENST00000588687 AHSA2Q719I0 299 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 NANOGP1Q8N7R0 232 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 SETD9Q8NE22 299 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 SETD6Q8TBK2 473 aa14□□□□□ -0.17
CCDC43-204ENST00000588687 C13orf42A0A1B0GVH6 325 aa13.99□□□□□ -0.17
CCDC43-204ENST00000588687 ANKRD34BA5PLL1 514 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms