RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 HIST1H3AP68431 136 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 ACSM6Q6P461 480 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 DPPA3Q6W0C5 159 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 ERASQ7Z444 233 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 ABHD5Q8WTS1 349 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 WDR54Q9H977 334 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 SIRT7Q9NRC8 400 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 RYDENQ9NUL5 291 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 TRAV38-1A0A0B4J264 116 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 SLC31A2O15432 143 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 OR7C2O60412 319 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 REG1BP48304 166 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 KCNIP4Q6PIL6 250 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 LYG1Q8N1E2 194 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 OR5D13Q8NGL4 314 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 RND1Q92730 232 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 TMEM54Q969K7 222 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 IFNL4K9M1U5 179 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 GLIPR1P48060 266 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 ZNF90Q03938 601 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 SRSF6Q13247 344 aaKnown RBP11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 LHFPL1Q86WI0 220 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 FADS6Q8N9I5 356 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 VN1R17PQ8TDU5 208 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 DDA1Q9BW61 102 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 MYOZ1Q9NP98 299 aaPredicted RBP11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
CACNA1A-209ENST00000587525 TCF21O43680 179 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 DSPP15924 2871 aaKnown RBP11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 WNT5AP41221 380 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 FGF12P61328 243 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 CEACAM21Q3KPI0 293 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 C10orf128Q5T292 105 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 REC114Q7Z4M0 266 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 TMEM178AQ8NBL3 297 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 TMEM171Q8WVE6 324 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 MUCL1Q96DR8 90 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 Q9N2K0 584 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 PTPRSQ13332 1948 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 MDFIC2A0A1B0GVS7 189 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 C20orf204Q6ZNR8 217 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 FGFRL1Q8N441 504 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 FAM89BQ8N5H3 189 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 TBX15Q96SF7 602 aa11.71□□□□□ -0.53
CACNA1A-209ENST00000587525 IGHV3-21A0A0B4J1V1 117 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 ZG16O60844 167 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 CDS2O95674 445 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 HAND1O96004 215 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 IRF2P14316 349 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 HOXB1P14653 301 aaPredicted RBP11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 ELOBQ15370 118 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 HEPN1Q6WQI6 88 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 GATAD1Q8WUU5 269 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 ACY3Q96HD9 319 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 LRFN3Q9BTN0 628 aa11.71□□□□□ -0.54
CACNA1A-209ENST00000587525 PGPEP1LA6NFU8 196 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 WFDC8Q8IUA0 241 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 RBKSQ9H477 322 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 LNP1A1A4G5 178 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 CBY3A6NI87 242 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 HIST1H1BP16401 226 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 PAX5Q02548 391 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 P2RY6Q15077 328 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 MSI2Q96DH6 328 aaKnown RBP11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 SELENOKQ9Y6D0 94 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 A0A0G2JRQ6 117 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 COL10A1Q03692 680 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 RNF24Q9Y225 148 aa11.7□□□□□ -0.54
CACNA1A-209ENST00000587525 A0A1B0GUS0 222 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 DBX1A6NMT0 343 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 M0R143 59 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 HLA-GP17693 338 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 PCP4P48539 62 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 OR2T10Q8NGZ9 312 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 SGK494Q96LW2 274 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 ATP23Q9Y6H3 246 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 TFPI2P48307 235 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 ZCCHC24Q8N2G6 241 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 ZNF439Q8NDP4 499 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 HIPK2Q9H2X6 1198 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 TMEM9BQ9NQ34 198 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 TMEM30CPA0ZSE6 113 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 LRRC3CA6NJW4 275 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 RNF212BA8MTL3 300 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 RAMP3O60896 148 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 S1PR2O95136 353 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 OR5A2Q8NGI9 324 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 DTD1Q8TEA8 209 aa11.69□□□□□ -0.54
CACNA1A-209ENST00000587525 RAB40CQ96S21 281 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms