RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 KCNS2Q9ULS6 477 aa12.16□□□□□ -0.46
NFIX-208ENST00000587260 SVEP1Q4LDE5 3571 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 RNASEK-C17orf49H0YIS7 233 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 J3QLI3 93 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 J3QR06 171 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 HSD17B6O14756 317 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 SLC31A2O15432 143 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 MPPED1O15442 326 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.46
NFIX-208ENST00000587260 S100GP29377 79 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 C4orf46Q504U0 113 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 PHLDA2Q53GA4 152 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 ZNF626Q68DY1 528 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 HCP5Q6MZN7 132 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 SGPP2Q8IWX5 399 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 ODF3L1Q8IXM7 274 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 CADM3Q8N126 398 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 ABHD12Q8N2K0 398 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 ZNF431Q8TF32 576 aaPredicted RBP12.15□□□□□ -0.46
NFIX-208ENST00000587260 NAA60Q9H7X0 242 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 PIPOXQ9P0Z9 390 aa12.15□□□□□ -0.46
NFIX-208ENST00000587260 ACANP16112 2415 aa12.15□□□□□ -0.47
NFIX-208ENST00000587260 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 RAB29O14966 203 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 CREBL2O60519 120 aaPredicted RBP12.14□□□□□ -0.47
NFIX-208ENST00000587260 PROP1O75360 226 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 B3GALNT1O75752 331 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 SFT2D2O95562 160 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 IGLV1-47P01700 117 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 GPR12P47775 334 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 NCR3LG1Q68D85 454 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 BEND2Q8NDZ0 799 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 OR11H6Q8NGC7 330 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 OR13D1Q8NGV5 346 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 CHAC2Q8WUX2 184 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 C5orf30Q96GV9 206 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 ABHD14BQ96IU4 210 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 SEC22CQ9BRL7 303 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 CLEC7AQ9BXN2 247 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 OR51J1Q9H342 316 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 HEXA-AS1Q9H8Q6 139 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 YAE1D1Q9NRH1 226 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 SDHAF2Q9NX18 166 aa12.14□□□□□ -0.47
NFIX-208ENST00000587260 DUS4LO95620 317 aaKnown RBP12.13□□□□□ -0.47
NFIX-208ENST00000587260 HLA-AP01891 365 aaKnown RBP12.13□□□□□ -0.47
NFIX-208ENST00000587260 BCAP31P51572 246 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 ZNF137PP52743 207 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 PRRX1P54821 245 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 RUSC1-AS1Q66K80 236 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 ZNF66Q6ZN08 573 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 C1orf229Q6ZS94 237 aaPredicted RBP12.13□□□□□ -0.47
NFIX-208ENST00000587260 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 OR52B4Q8NGK2 314 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 MITD1Q8WV92 249 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
NFIX-208ENST00000587260 hCG_2014768A0A024R1R8 64 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 A0A0B4J2A0 478 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 TEX13DA0A0J9YY54 714 aaPredicted RBP12.12□□□□□ -0.47
NFIX-208ENST00000587260 TOR1AO14656 332 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 ARG1P05089 322 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 IGHV4-38-2P0DP08 117 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 VAMP1P23763 118 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 F2RP25116 425 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 CBX3Q13185 183 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 FAM71F2Q6NXP2 309 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 IL17RELQ6ZVW7 336 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 ST6GALNAC6Q969X2 333 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 HSD17B10Q99714 261 aaKnown RBP12.12□□□□□ -0.47
NFIX-208ENST00000587260 SHPKQ9UHJ6 478 aa12.12□□□□□ -0.47
NFIX-208ENST00000587260 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 CENPVL3A0A0U1RRI6 287 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 C3orf85A0A1B0GTC6 90 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 LY6G6DO95868 133 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 IFNA2P01563 188 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 TRAPPC2P0DI81 140 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 TRAPPC2BP0DI82 140 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 ANXA3P12429 323 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 GPR157Q5UAW9 335 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 BRD3OSQ6XYD6 125 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 ZNF833PQ6ZTB9 187 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 LYG1Q8N1E2 194 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 TCTEX1D1Q8N7M0 179 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 OR10X1Q8NGY0 326 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 HMX3A6NHT5 357 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 ODF3BA8MYP8 253 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 H0Y980 276 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 DUTP33316 252 aaKnown RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 RRAS2P62070 204 aaPredicted RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 TMEM187Q14656 261 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 KLF17Q5JT82 389 aaPredicted RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 CLEC9AQ6UXN8 241 aa12.11□□□□□ -0.47
NFIX-208ENST00000587260 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
NFIX-208ENST00000587260 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms