RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CD300LFQ8TDQ1 290 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 GAL3ST2Q9H3Q3 398 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 HEXA-AS1Q9H8Q6 139 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 BEX4Q9NWD9 120 aaPredicted RBP8.6□□□□□ -1.03
LIG3-203ENST00000585370 IDI2-AS1Q9NZ38 188 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 PRR13Q9NZ81 148 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 MBD2Q9UBB5 411 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 LAMP3Q9UQV4 416 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 U3KQ87 197 aa8.6□□□□□ -1.03
LIG3-203ENST00000585370 PLCE1Q9P212 2302 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 ANK3Q12955 4377 aaKnown RBP8.59□□□□□ -1.03
LIG3-203ENST00000585370 A0A1B0GU03 582 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 E5RGE8 158 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 TAAR5O14804 337 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 ST8SIA3O43173 380 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 ADAM20O43506 726 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 IGLV2-14P01704 120 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 MMP9P14780 707 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 NDUFB7P17568 137 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 PPP1CCP36873 323 aaKnown RBP8.59□□□□□ -1.03
LIG3-203ENST00000585370 LOXL3P58215 753 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 RAB32Q13637 225 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 C17orf58Q2M2W7 97 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 FAM219AQ8IW50 185 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 FAM216BQ8N7L0 139 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 ZNF680Q8NEM1 530 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 RFESDQ8TAC1 157 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 LHFPL5Q8TAF8 219 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 DCUN1D4Q92564 292 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 TIMD4Q96H15 378 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 AQP10Q96PS8 301 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 OR2D2Q9H210 308 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 GFOD1Q9NXC2 390 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 NSG2Q9Y328 171 aa8.59□□□□□ -1.03
LIG3-203ENST00000585370 TRBV23-1A0A0A0MS06 115 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 MPTX1A8MV57 137 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 BCL2L11O43521 198 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 DEDDO75618 318 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
LIG3-203ENST00000585370 KIR2DS2P43631 304 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 GPR12P47775 334 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 ARHGDIBP52566 201 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 S100A10P60903 97 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 RPL31P62899 125 aaKnown RBP8.58□□□□□ -1.04
LIG3-203ENST00000585370 UBA52P62987 128 aaKnown RBP8.58□□□□□ -1.04
LIG3-203ENST00000585370 EIF5AP63241 154 aaKnown RBP8.58□□□□□ -1.04
LIG3-203ENST00000585370 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
LIG3-203ENST00000585370 GNMTQ14749 295 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 NMSQ5H8A3 153 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 GPR157Q5UAW9 335 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 C11orf71Q6IPW1 123 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 OR4D5Q8NGN0 318 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 OR51H1Q8NH63 302 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 UBALD1Q8TB05 177 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 RAB1CQ92928 201 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 RRNAD1Q96FB5 475 aaKnown RBP8.58□□□□□ -1.04
LIG3-203ENST00000585370 ADTRPQ96IZ2 230 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 AGMATQ9BSE5 352 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 DCTN5Q9BTE1 182 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 CACFD1Q9UGQ2 172 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 UBQLN2Q9UHD9 624 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 PSG11Q9UQ72 335 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 POMT1Q9Y6A1 747 aa8.58□□□□□ -1.04
LIG3-203ENST00000585370 USF3Q68DE3 2245 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 A0A1W2PPH5 198 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 RNF222A6NCQ9 220 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 H0YIZ8 118 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 K7EPK0 472 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 RBFOX2O43251 390 aaKnown RBP eCLIP8.57□□□□□ -1.04
LIG3-203ENST00000585370 TNFSF12O43508 249 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 MBPP02686 304 aaPredicted RBP8.57□□□□□ -1.04
LIG3-203ENST00000585370 DANCRP0C864 163 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 DAOP14920 347 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 COL8A2P25067 703 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 NKX2-1P43699 371 aaPredicted RBP8.57□□□□□ -1.04
LIG3-203ENST00000585370 P2RY1P47900 373 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 AP2S1P53680 142 aaPredicted RBP8.57□□□□□ -1.04
LIG3-203ENST00000585370 TMEM33P57088 247 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 RAB14P61106 215 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 TMEM155Q4W5P6 130 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 CLEC9AQ6UXN8 241 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 HEPN1Q6WQI6 88 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 CIARTQ8N365 385 aaPredicted RBP8.57□□□□□ -1.04
LIG3-203ENST00000585370 OR1S1Q8NH92 325 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 PHYHIPLQ96FC7 376 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 ZNF714Q96N38 554 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 PARP12Q9H0J9 701 aaKnown RBP8.57□□□□□ -1.04
LIG3-203ENST00000585370 SDHAF2Q9NX18 166 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 DCAF16Q9NXF7 216 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 MIOXQ9UGB7 285 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 RPUSD1Q9UJJ7 312 aaKnown RBP8.57□□□□□ -1.04
LIG3-203ENST00000585370 RNF150Q9ULK6 438 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 PRELID3BQ9Y3B1 194 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 DSCAMO60469 2012 aa8.57□□□□□ -1.04
LIG3-203ENST00000585370 HIVEP2P31629 2446 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 ATRQ13535 2644 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 KIAA2026Q5HYC2 2103 aa8.56□□□□□ -1.04
LIG3-203ENST00000585370 IGHV3-43A0A0B4J1X8 118 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms