RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SUPT4H1P63272 117 aaKnown RBP13.11□□□□□ -0.31
SS18-226ENST00000585241 PHLDA2Q53GA4 152 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
SS18-226ENST00000585241 ZNF66Q6ZN08 573 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 KCTD9Q7L273 389 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 OR10X1Q8NGY0 326 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 CAPSLQ8WWF8 208 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 HSD17B10Q99714 261 aaKnown RBP13.11□□□□□ -0.31
SS18-226ENST00000585241 C7orf69Q9H7B7 122 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 ITGB1BP2Q9UKP3 347 aa13.11□□□□□ -0.31
SS18-226ENST00000585241 MPPED1O15442 326 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 DUTP33316 252 aaKnown RBP13.1□□□□□ -0.31
SS18-226ENST00000585241 PRB3Q04118 309 aaPredicted RBP13.1□□□□□ -0.31
SS18-226ENST00000585241 KRTAP1-1Q07627 177 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 PPP1R1AQ13522 171 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 TATDN3Q17R31 274 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 RPL39P5Q59GN2 51 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 MINOS1Q5TGZ0 78 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 LYG2Q86SG7 212 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 TBC1D26Q86UD7 250 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 LHX4Q969G2 390 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 S1PR3Q99500 378 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 NAA60Q9H7X0 242 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
SS18-226ENST00000585241 MINOS1-NBL1R4GNA1 71 aa13.1□□□□□ -0.31
SS18-226ENST00000585241 FLNAP21333 2647 aaKnown RBP13.1□□□□□ -0.31
SS18-226ENST00000585241 CENPVL3A0A0U1RRI6 287 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 SNRPGP15A8MWD9 76 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 SFT2D2O95562 160 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 ARG1P05089 322 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 AKR1C4P17516 323 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 F2RP25116 425 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 HTR1DP28221 377 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 DHRS2Q13268 280 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 MIDNQ504T8 468 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 LDLRAD2Q5SZI1 272 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 SPNS3Q6ZMD2 512 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 SGPP2Q8IWX5 399 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 DDB2Q92466 427 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 BEX2Q9BXY8 128 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 BEX1Q9HBH7 125 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 FAM212BQ9NTI7 297 aaPredicted RBP13.09□□□□□ -0.31
SS18-226ENST00000585241 DPM3Q9P2X0 92 aa13.09□□□□□ -0.31
SS18-226ENST00000585241 C9orf170A2RU37 121 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 RNF212BA8MTL3 300 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 H0Y980 276 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 M0R1X1 148 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 AVPP01185 164 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 FSHBP01225 129 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.32
SS18-226ENST00000585241 ZNF816Q0VGE8 651 aaPredicted RBP13.08□□□□□ -0.32
SS18-226ENST00000585241 CATR1Q13166 79 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 C4orf46Q504U0 113 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 C11orf88Q6PI97 169 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 TCTEX1D1Q8N7M0 179 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 ZNF431Q8TF32 576 aaPredicted RBP13.08□□□□□ -0.32
SS18-226ENST00000585241 ADTRPQ96IZ2 230 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 SEC22CQ9BRL7 303 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 GPN1Q9HCN4 374 aaPredicted RBP13.08□□□□□ -0.32
SS18-226ENST00000585241 ALG5Q9Y673 324 aa13.08□□□□□ -0.32
SS18-226ENST00000585241 CSPG4Q6UVK1 2322 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 TRAV40A0A0B4J280 105 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 IGHV1-69DA0A0B4J2H0 117 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 TEX13DA0A0J9YY54 714 aaPredicted RBP13.07□□□□□ -0.32
SS18-226ENST00000585241 C3orf85A0A1B0GTC6 90 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 LINC00473A8K010 186 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 LEUTXA8MZ59 168 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 OOSP1A8MZH6 123 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 SMAD7O15105 426 aaKnown RBP13.07□□□□□ -0.32
SS18-226ENST00000585241 TXNL1O43396 289 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 TNFSF12O43508 249 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 CD5LO43866 347 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 DUS4LO95620 317 aaKnown RBP13.07□□□□□ -0.32
SS18-226ENST00000585241 IGHV1-69P01742 117 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 HLA-AP01891 365 aaKnown RBP13.07□□□□□ -0.32
SS18-226ENST00000585241 UCP1P25874 307 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 THBS3P49746 956 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 DIAPH2-AS1Q14236 149 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 KLF17Q5JT82 389 aaPredicted RBP13.07□□□□□ -0.32
SS18-226ENST00000585241 TPTE2P1Q5T6R2 138 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 MITD1Q8WV92 249 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 AJUBAQ96IF1 538 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 GPHA2Q96T91 129 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 NABP2Q9BQ15 211 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 LIN7CQ9NUP9 197 aaKnown RBP13.07□□□□□ -0.32
SS18-226ENST00000585241 KCNIP3Q9Y2W7 256 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 ZANQ9Y493 2812 aa13.07□□□□□ -0.32
SS18-226ENST00000585241 ZNF469Q96JG9 3925 aaPredicted RBP13.06□□□□□ -0.32
SS18-226ENST00000585241 A0A0A6YYJ9 748 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 A0A0B4J2A0 478 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 NPFFO15130 113 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 OR5AC1P0C628 307 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 CT45A6P0DMU7 189 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 CT45A5P0DMU8 189 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 CT45A7P0DMV0 189 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 VAMP1P23763 118 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 CEACAM3P40198 252 aa13.06□□□□□ -0.32
SS18-226ENST00000585241 TMEM187Q14656 261 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms