RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 PXT1Q8NFP0 134 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR10H4Q8NGA5 316 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR10A6Q8NH74 314 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLC25A40Q8TBP6 338 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ABHD3Q8WU67 409 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ACOT12Q8WYK0 555 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DCUN1D4Q92564 292 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RASL10AQ92737 203 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FOXN4Q96NZ1 517 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CCL19Q99731 98 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C1orf50Q9BV19 199 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MROQ9BYG7 248 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 B3GNT2Q9NY97 397 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SPRR3Q9UBC9 169 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 POLR1DQ9Y2S0 133 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SAMHD1Q9Y3Z3 626 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FAM215AQ9Y5M1 114 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MINOS1-NBL1R4GNA1 71 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ATMQ13315 3056 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MYO7AQ13402 2215 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 HEATR5BQ9P2D3 2071 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C4orf51C9J302 202 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FXYD1O00168 92 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DCTN6O00399 190 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SGCEO43556 437 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR2F2O95006 317 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SERPINA1P01009 418 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RAB5AP20339 215 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CEACAM3P40198 252 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 GPR4P46093 362 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 YAP1P46937 504 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CRIP2P52943 208 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CMC4P56277 68 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 LCN6P62502 163 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CDK5Q00535 292 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TFF3Q07654 80 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SLAQ13239 276 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8B8Q15620 311 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR7A5Q15622 319 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 YIF1BQ5BJH7 314 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C12orf73Q69YU5 71 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TNFAIP8L2Q6P589 184 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RPL22L1Q6P5R6 122 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 PRSS41Q7RTY9 318 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DEFB107AQ8IZN7 70 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 LRRC75AQ8NAA5 344 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR4K5Q8NGD3 323 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR1S2Q8NGQ3 325 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SCGB3A2Q96PL1 93 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C7orf50Q9BRJ6 194 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TM2D1Q9BX74 207 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ANKRD60Q9BZ19 345 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SELENOIQ9C0D9 397 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CHST6Q9GZX3 395 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TLNRD1Q9H1K6 362 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DEFB127Q9H1M4 99 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DYNLRB1Q9NP97 96 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ACOT13Q9NPJ3 140 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF446Q9NWS9 450 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MED11Q9P086 117 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 VAPAQ9P0L0 249 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR5V1Q9UGF6 321 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SIGLEC7Q9Y286 467 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 FIS1Q9Y3D6 152 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MRPS18BQ9Y676 258 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MEGF8Q7Z7M0 2845 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 KMT2AQ03164 3969 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 UTP20O75691 2785 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DOCK9Q9BZ29 2069 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1B0GU03 582 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 A0A1B0GVI7 797 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 METTL15A6NJ78 407 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 B4DSR2 109 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CCRL2O00421 344 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SAP18O00422 153 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CHST1O43916 411 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 BRI3O95415 125 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 GAPDHP04406 335 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 HSD11B1P28845 292 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CD80P33681 288 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 KIR2DS2P43631 304 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OMPP47874 163 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CAV3P56539 151 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 TAS2R60P59551 318 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 C18orf21Q32NC0 220 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 SMIM21Q3B7S5 101 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ACTBL2Q562R1 376 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 WDR25Q64LD2 544 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 LCN12Q6JVE5 192 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 REG3GQ6UW15 175 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MRPL21Q7Z2W9 205 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 MYPOPQ86VE0 399 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 CIARTQ8N365 385 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 KRTCAP2Q8N6L1 136 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF283Q8N7M2 679 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR8G5Q8NG78 346 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 OR6Q1Q8NGQ2 317 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 DOK4Q8TEW6 326 aa1.51□□□□□ -2.17
SMCHD1-211ENST00000584897 RNF133Q8WVZ7 376 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms