RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 AGTR1P30556 359 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 LCN1P31025 176 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 HSPA9P38646 679 aaKnown RBP0.86□□□□□ -2.27
SKA2-210ENST00000584089 SCGB1D4Q6XE38 83 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 SLC35E3Q7Z769 313 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 NATD1Q8N6N6 113 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 OR8B12Q8NGG6 310 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 OR2D3Q8NGH3 330 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 CCDC12Q8WUD4 166 aaPredicted RBP0.86□□□□□ -2.27
SKA2-210ENST00000584089 TMEM56Q96MV1 263 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 NKX6-2Q9C056 277 aaPredicted RBP0.86□□□□□ -2.27
SKA2-210ENST00000584089 GLS2Q9UI32 602 aa0.86□□□□□ -2.27
SKA2-210ENST00000584089 PTPRBP23467 1997 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 MDFIC2A0A1B0GVS7 189 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 A0A1W2PQD3 144 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 RFPL4AA6NLU0 287 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 RFPL4AL1F8VTS6 287 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 NDUFB2O95178 105 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 G6PCP35575 357 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 DAPP51397 102 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 RAB8AP61006 207 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 GLO1Q04760 184 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 ZNF791Q3KP31 576 aaPredicted RBP0.85□□□□□ -2.27
SKA2-210ENST00000584089 FREM1Q5H8C1 2179 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 AMTNQ6UX39 209 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 LRRC28Q86X40 367 aaPredicted RBP0.85□□□□□ -2.27
SKA2-210ENST00000584089 SLC13A5Q86YT5 568 aaPredicted RBP0.85□□□□□ -2.27
SKA2-210ENST00000584089 CLDND2Q8NHS1 167 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 ASB17Q8WXJ9 295 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 EIF5A2Q9GZV4 153 aaKnown RBP0.85□□□□□ -2.27
SKA2-210ENST00000584089 OR51B6Q9H340 312 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 C8orf4Q9NR00 106 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 MS4A12Q9NXJ0 267 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 HHLA3Q9XRX5 114 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 MYH11P35749 1972 aa0.85□□□□□ -2.27
SKA2-210ENST00000584089 UBE2L6O14933 153 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 C1QCP02747 245 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 CRYBA1P05813 215 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 S100A9P06702 114 aaKnown RBP0.84□□□□□ -2.27
SKA2-210ENST00000584089 PSMD7P51665 324 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 STC1P52823 247 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 CTBP2P56545 445 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 SLC38A11Q08AI6 406 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 TMEM31Q5JXX7 168 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 RBM48Q5RL73 367 aaKnown RBP0.84□□□□□ -2.27
SKA2-210ENST00000584089 XKRXQ6PP77 449 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 DYNC2LI1Q8TCX1 351 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 OR7D2Q96RA2 312 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 SIKE1Q9BRV8 207 aa0.84□□□□□ -2.27
SKA2-210ENST00000584089 SOX21Q9Y651 276 aaPredicted RBP0.84□□□□□ -2.27
SKA2-210ENST00000584089 WDR90Q96KV7 1748 aa0.84□□□□□ -2.28
SKA2-210ENST00000584089 NPATQ14207 1427 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 IGKV2-40A0A087WW87 121 aaPredicted RBP0.83□□□□□ -2.28
SKA2-210ENST00000584089 F8W036 122 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 GSTZ1O43708 216 aaPredicted RBP0.83□□□□□ -2.28
SKA2-210ENST00000584089 ARL6IP5O75915 188 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 IGKV2D-40P01614 121 aaPredicted RBP0.83□□□□□ -2.28
SKA2-210ENST00000584089 HBZP02008 142 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 GP1BAP07359 652 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 ADORA1P30542 326 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 CA7P43166 264 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 DLX6P56179 175 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 TAS2R30P59541 319 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 TMEM258P61165 79 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 DAD1P61803 113 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 TMEM42Q69YG0 159 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 OR10K2Q6IF99 312 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 SMCR5Q8TEV8 140 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 SMIM12Q96EX1 92 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 CYTH2Q99418 400 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 SLC2A9Q9NRM0 540 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 NRBP2Q9NSY0 501 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 STK38LQ9Y2H1 464 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.83□□□□□ -2.28
SKA2-210ENST00000584089 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
SKA2-210ENST00000584089 MAP3K19Q56UN5 1328 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 CHD5Q8TDI0 1954 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 PCDH15Q96QU1 1955 aa0.83□□□□□ -2.28
SKA2-210ENST00000584089 DLG5Q8TDM6 1919 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 INTS1Q8N201 2190 aaKnown RBP0.82□□□□□ -2.28
SKA2-210ENST00000584089 IGHV3-64A0A075B6Q5 118 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 IGKV3D-7A0A0C4DH55 119 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 IGKV3OR2-268A0A0C4DH90 116 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 LOC100506127A0A0U1RQW1 187 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 BHLHE40O14503 412 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 MPZL2O60487 215 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 ASS1P00966 412 aaKnown RBP0.82□□□□□ -2.28
SKA2-210ENST00000584089 NPYP01303 97 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 BPGMP07738 259 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 OR10J1P30954 320 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 CRATP43155 626 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 HERVK_113P63121 156 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 SYCP1Q15431 976 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 Q3ZCU0 254 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 DRAM2Q6UX65 266 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 UNQ6190/PRO20217Q6UXQ8 127 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 ROS1P08922 2347 aa0.82□□□□□ -2.28
SKA2-210ENST00000584089 BRWD1Q9NSI6 2320 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms