RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 OR4A4PQ8NGN8 299 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 MCFD2Q8NI22 146 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 RPEQ96AT9 228 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 CREB3L1Q96BA8 519 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 RCC1LQ96I51 464 aaKnown RBP12.39□□□□□ -0.43
SKA2-209ENST00000583976 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 PARP12Q9H0J9 701 aaKnown RBP12.39□□□□□ -0.43
SKA2-209ENST00000583976 EXTL2Q9UBQ6 330 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 TENM3Q9P273 2699 aa12.39□□□□□ -0.43
SKA2-209ENST00000583976 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 ZNF701M0R085 212 aaPredicted RBP12.38□□□□□ -0.43
SKA2-209ENST00000583976 RGS11O94810 467 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 HLA-DQB1P01920 261 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 BRS3P32247 399 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 REG1BP48304 166 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 SRSF7Q16629 238 aaKnown RBP eCLIP12.38□□□□□ -0.43
SKA2-209ENST00000583976 Q3ZCU0 254 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 SLC25A48Q6ZT89 311 aaKnown RBP12.38□□□□□ -0.43
SKA2-209ENST00000583976 MRPL41Q8IXM3 137 aaKnown RBP12.38□□□□□ -0.43
SKA2-209ENST00000583976 LINC00311Q8N616 119 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 OR56B4Q8NH76 319 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 TOMM40LQ969M1 308 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 DGCR14Q96DF8 476 aaKnown RBP12.38□□□□□ -0.43
SKA2-209ENST00000583976 ABHD14AQ9BUJ0 271 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 NDUFA13Q9P0J0 144 aa12.38□□□□□ -0.43
SKA2-209ENST00000583976 ST8SIA5O15466 376 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 PRSS3P35030 304 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 EGFEM1PQ0D2K5 195 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 RNASE12Q5GAN4 147 aaKnown RBP12.37□□□□□ -0.43
SKA2-209ENST00000583976 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 OR2AK2Q8NG84 335 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 NOL4LQ96MY1 436 aaPredicted RBP12.37□□□□□ -0.43
SKA2-209ENST00000583976 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
SKA2-209ENST00000583976 A0A1W2PPI3 338 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 PSMB11A5LHX3 300 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 SNRNP70P08621 437 aaKnown RBP12.36□□□□□ -0.43
SKA2-209ENST00000583976 IL3RAP26951 378 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 ARHGDIBP52566 201 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 DEFB121Q5J5C9 76 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 CNIH2Q6PI25 160 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 Q6ZS49 121 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 C8orf86Q6ZUL3 223 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 HOGA1Q86XE5 327 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 BEST4Q8NFU0 473 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 GINS4Q9BRT9 223 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 CABLES2Q9BTV7 478 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 IFT46Q9NQC8 304 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 RDH8Q9NYR8 311 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 ADAM30Q9UKF2 790 aa12.36□□□□□ -0.43
SKA2-209ENST00000583976 HUWE1Q7Z6Z7 4374 aaKnown RBP12.36□□□□□ -0.43
SKA2-209ENST00000583976 TRBV6-7A0A0A0MS04 114 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 J3QRK9 145 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 HSD17B6O14756 317 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 GAPDHP04406 335 aaKnown RBP12.35□□□□□ -0.43
SKA2-209ENST00000583976 CBX5P45973 191 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 ARPC4P59998 168 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 RPL23AP62750 156 aaKnown RBP12.35□□□□□ -0.43
SKA2-209ENST00000583976 CCDC144NLQ6NUI1 221 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 DIRAS2Q96HU8 199 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 ABHD14BQ96IU4 210 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 NXF2Q9GZY0 626 aaKnown RBP12.35□□□□□ -0.43
SKA2-209ENST00000583976 C11orf54Q9H0W9 315 aaPredicted RBP12.35□□□□□ -0.43
SKA2-209ENST00000583976 ANXA10Q9UJ72 324 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 RNF150Q9ULK6 438 aa12.35□□□□□ -0.43
SKA2-209ENST00000583976 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 DUS4LO95620 317 aaKnown RBP12.34□□□□□ -0.43
SKA2-209ENST00000583976 OR3A3P47888 321 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 RAB7AP51149 207 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 CD69Q07108 199 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 LY6G6FQ5SQ64 297 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 MOB3BQ86TA1 216 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 ODF3L1Q8IXM7 274 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 DRAM1Q8N682 238 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 C5orf56Q8N8D9 126 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 RTN4IP1Q8WWV3 396 aaPredicted RBP12.34□□□□□ -0.43
SKA2-209ENST00000583976 EDARADDQ8WWZ3 215 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 ST6GALNAC6Q969X2 333 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 ABHD1Q96SE0 405 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 IFI27L2Q9H2X8 130 aa12.34□□□□□ -0.43
SKA2-209ENST00000583976 RYR2Q92736 4967 aa12.33□□□□□ -0.43
SKA2-209ENST00000583976 SAA2-SAA4A0A096LPE2 208 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 IGHV1-3A0A0C4DH29 117 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 OOSP1A8MZH6 123 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 CTXN2P0C2S0 81 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 SAA2P0DJI9 122 aaPredicted RBP12.33□□□□□ -0.44
SKA2-209ENST00000583976 NFYAP23511 347 aaPredicted RBP12.33□□□□□ -0.44
SKA2-209ENST00000583976 TNFSF8P32971 234 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 THBS3P49746 956 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 HES1Q14469 280 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 HNF4GQ14541 408 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 TGIF2LXQ8IUE1 241 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 KLHL30-AS1Q8NEE0 82 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 GPX8Q8TED1 209 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 SNAPC3Q92966 411 aa12.33□□□□□ -0.44
SKA2-209ENST00000583976 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms