RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 DEFB121Q5J5C9 76 aa16.32■□□□□ 0.2
SRSF1-206ENST00000583741 ZNF714Q96N38 554 aa16.32■□□□□ 0.2
SRSF1-206ENST00000583741 TINAGL1Q9GZM7 467 aaPredicted RBP16.32■□□□□ 0.2
SRSF1-206ENST00000583741 MBNL3Q9NUK0 354 aaKnown RBP16.32■□□□□ 0.2
SRSF1-206ENST00000583741 TRDCB7Z8K6 153 aa16.31■□□□□ 0.2
SRSF1-206ENST00000583741 OR3A3P47888 321 aa16.31■□□□□ 0.2
SRSF1-206ENST00000583741 HLA-DRB3P79483 266 aa16.31■□□□□ 0.2
SRSF1-206ENST00000583741 NCOR1P1Q9H4R4 102 aa16.31■□□□□ 0.2
SRSF1-206ENST00000583741 IGHV2-26A0A0B4J1V2 119 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 TCRBV4S1A1TA0A5B7 111 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 FABP7O15540 132 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 AMY2AP04746 511 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 CDK10Q15131 360 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 C6orf183Q5T699 404 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 MINOS1Q5TGZ0 78 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 C10orf99Q6UWK7 81 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 NRARPQ7Z6K4 114 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 CENPVQ7Z7K6 275 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-206ENST00000583741 OR56B4Q8NH76 319 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 ENKURQ8TC29 256 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 RCC1LQ96I51 464 aaKnown RBP16.3■□□□□ 0.2
SRSF1-206ENST00000583741 KCNIP1Q9NZI2 227 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 TSSC4Q9Y5U2 329 aaPredicted RBP16.3■□□□□ 0.2
SRSF1-206ENST00000583741 MINOS1-NBL1R4GNA1 71 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 KIAA2026Q5HYC2 2103 aa16.3■□□□□ 0.2
SRSF1-206ENST00000583741 FAM240BA0A1B0GVZ2 78 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 IFNA6P05013 189 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 GSTT2P0CG29 244 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 CD24P25063 80 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 HOXD3P31249 432 aaPredicted RBP16.29■□□□□ 0.2
SRSF1-206ENST00000583741 BTCP35070 178 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 GLP1RP43220 463 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 RFX2P48378 723 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 TRAT1Q6PIZ9 186 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 OR13A1Q8NGR1 328 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 MRGPRDQ8TDS7 321 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 EHFQ9NZC4 300 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 OR6C3Q9NZP0 311 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 SESN1Q9Y6P5 492 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 DISC1C4P0D8 188 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 SCTP09683 121 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 MEF2CQ06413 473 aaPredicted RBP16.29■□□□□ 0.2
SRSF1-206ENST00000583741 EGFEM1PQ0D2K5 195 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 HMGN3Q15651 99 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 OVCH2Q7RTZ1 564 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 OR4A4PQ8NGN8 299 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 TAF9BQ9HBM6 251 aa16.29■□□□□ 0.2
SRSF1-206ENST00000583741 SDCBPO00560 298 aaPredicted RBP16.28■□□□□ 0.2
SRSF1-206ENST00000583741 ZNF735P0CB33 412 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 SLC6A1P30531 599 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 TRIM16LQ309B1 348 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 ZNF554Q86TJ5 538 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 ARRDC1Q8N5I2 433 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 ZNF565Q8N9K5 539 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 OR51S1Q8NGJ8 323 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 OR4P4Q8NGL7 312 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 CHPT1Q8WUD6 406 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 CLEC7AQ9BXN2 247 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 TMEM133Q9H2Q1 129 aa16.28■□□□□ 0.2
SRSF1-206ENST00000583741 TRGV10A0A0A0MS01 117 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 hADV38S2A0JD32 116 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 C12orf77C9JDV5 145 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 MMP23AO75900 390 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 DUS4LO95620 317 aaKnown RBP16.27■□□□□ 0.19
SRSF1-206ENST00000583741 OR5H8P0DN80 308 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 CCR6P51684 374 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 TSPAN5P62079 268 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 CD69Q07108 199 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 OXA1LQ15070 435 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 ABCA11PQ4W5N1 156 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 IGSF11Q5DX21 431 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 C5orf24Q7Z6I8 188 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 PRR18Q8N4B5 295 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 MINDY2Q8NBR6 621 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 WWC2-AS2Q96NR7 200 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 PRRT1Q99946 306 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 SCP2D1Q9UJQ7 156 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 LINC00312Q9Y6C7 94 aa16.27■□□□□ 0.19
SRSF1-206ENST00000583741 SH2D7A6NKC9 451 aaPredicted RBP16.26■□□□□ 0.19
SRSF1-206ENST00000583741 CTXN2P0C2S0 81 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 GZMHP20718 246 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 SSTR5P35346 364 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 SCGB2B2Q4G0G5 96 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 KHDC1LQ5JSQ8 128 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 C16orf82Q7Z2V1 217 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 TMEM17Q86X19 198 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 LINC00482Q8N8I6 264 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 OR4X2Q8NGF9 303 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 IL1F10Q8WWZ1 152 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 KIRREL1Q96J84 757 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 CABLES2Q9BTV7 478 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 SLC2A8Q9NY64 477 aa16.26■□□□□ 0.19
SRSF1-206ENST00000583741 BET1O15155 118 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 AMY1AP04745 511 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 SPNP16150 400 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 HTR1DP28221 377 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 IDO2Q6ZQW0 420 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 CENPSQ8N2Z9 138 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 UBALD1Q8TB05 177 aa16.25■□□□□ 0.19
SRSF1-206ENST00000583741 ARL11Q969Q4 196 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms