RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF818PQ6ZRF7 136 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DRAM1Q8N682 238 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 BVESQ8NE79 360 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ST6GALNAC6Q969X2 333 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 C5orf30Q96GV9 206 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF486Q96H40 463 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF251Q9BRH9 671 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 KCNS2Q9ULS6 477 aa13.27□□□□□ -0.29
CDK5RAP3-228ENST00000583363 A0A1W2PRD5 423 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 A0A1W2PRF3 423 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 A0A1W2PRM7 423 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ARPC1BO15143 372 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 H2AFB2P0C5Z0 115 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PI3P19957 117 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF137PP52743 207 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 EIF4EBP1Q13541 118 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 KLF17Q5JT82 389 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 LDLRAD2Q5SZI1 272 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PLET1Q6UQ28 207 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CHPT1Q8WUD6 406 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CREB3L1Q96BA8 519 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MARVELD1Q9BSK0 173 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 C20orf85Q9H1P6 137 aa13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 C14orf166Q9Y224 244 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TRAV6A0A075B6T7 132 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 SAA2-SAA4A0A096LPE2 208 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 IGHV1-69DA0A0B4J2H0 117 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PGLYRP1O75594 196 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 IGHV1-69P01742 117 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RLN1P04808 185 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 SAA2P0DJI9 122 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 IGHV4-38-2P0DP08 117 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 IL3RAP26951 378 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 HTR1DP28221 377 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RND3P61587 244 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MIDNQ504T8 468 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PHLDA2Q53GA4 152 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RPL39P5Q59GN2 51 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MINOS1Q5TGZ0 78 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CENPSQ8N2Z9 138 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MINDY2Q8NBR6 621 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ADAD2Q8NCV1 583 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 AJUBAQ96IF1 538 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 S1PR3Q99500 378 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 NUDT15Q9NV35 164 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DPM3Q9P2X0 92 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TBL2Q9Y4P3 447 aaKnown RBP13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 AMMECR1Q9Y4X0 333 aaPredicted RBP13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MINOS1-NBL1R4GNA1 71 aa13.25□□□□□ -0.29
CDK5RAP3-228ENST00000583363 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 NPFFO15130 113 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MECP2P51608 486 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RAG2P55895 527 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 LGALS4P56470 323 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PIGPP57054 158 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DHODHQ02127 395 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DIAPH2-AS1Q14236 149 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TRIM16LQ309B1 348 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ABCA11PQ4W5N1 156 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 GPR157Q5UAW9 335 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 FAM71F2Q6NXP2 309 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TMED4Q7Z7H5 227 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 LHFPL4Q7Z7J7 247 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 SLC25A42Q86VD7 318 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CMTM1Q8IZ96 169 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 PIP4P2Q8N4L2 257 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TMEM230Q96A57 120 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 SLC2A9Q9NRM0 540 aa13.24□□□□□ -0.29
CDK5RAP3-228ENST00000583363 IGHV3OR16-10A0A075B7F0 116 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TRAV40A0A0B4J280 105 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RNF212BA8MTL3 300 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 INMT-MINDY4F8WBC2 141 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MPPED1O15442 326 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 FSHBP01225 129 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ANXA7P20073 488 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 BPIFB3P59826 476 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TPTE2P1Q5T6R2 138 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 ZNF66Q6ZN08 573 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 NANPQ8TBE9 248 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 MALSU1Q96EH3 234 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 GPHA2Q96T91 129 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 YAE1D1Q9NRH1 226 aa13.23□□□□□ -0.29
CDK5RAP3-228ENST00000583363 M0R1X1 148 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TNFSF12O43508 249 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 GAPDHP04406 335 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CT45A6P0DMU7 189 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CT45A5P0DMU8 189 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 CT45A7P0DMV0 189 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 VSIG10L2P0DP72 767 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 AKR1C4P17516 323 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 S100GP29377 79 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 DUTP33316 252 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RAB25P57735 213 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 LINC00205P59089 165 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 TAS2R31P59538 309 aa13.22□□□□□ -0.29
CDK5RAP3-228ENST00000583363 RPL30P62888 115 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms