RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 NABP2Q9BQ15 211 aa16.09■□□□□ 0.17
TOP3A-213ENST00000582230 MRPL20Q9BYC9 149 aaKnown RBP16.09■□□□□ 0.17
TOP3A-213ENST00000582230 RBMX2Q9Y388 322 aaKnown RBP16.09■□□□□ 0.17
TOP3A-213ENST00000582230 JMJD1CQ15652 2540 aa16.09■□□□□ 0.17
TOP3A-213ENST00000582230 ZFHX3Q15911 3703 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 FAM181BA6NEQ2 426 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 PPYP01298 95 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 SNRNP70P08621 437 aaKnown RBP16.08■□□□□ 0.16
TOP3A-213ENST00000582230 CSF1P09603 554 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 AADACP22760 399 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 CD24P25063 80 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 TAS2R19P59542 299 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 LSAMPQ13449 338 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 EBI3Q14213 229 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 KRTAP21-3Q3LHN1 58 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 PYDC2Q56P42 97 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 VAX1Q5SQQ9 334 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 CCBE1Q6UXH8 406 aaPredicted RBP16.08■□□□□ 0.16
TOP3A-213ENST00000582230 LINC00299Q6ZSB3 139 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 C16orf82Q7Z2V1 217 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 ZNF645Q8N7E2 425 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 SDHAF2Q9NX18 166 aa16.08■□□□□ 0.16
TOP3A-213ENST00000582230 J3QRK9 145 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 PROP1O75360 226 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 IGKV1D-33P01593 117 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 IGKV1-33P01594 117 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 CT45A6P0DMU7 189 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 CT45A5P0DMU8 189 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 CT45A7P0DMV0 189 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 HES1Q14469 280 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 KRTAP24-1Q3LI83 254 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 RNASE10Q5GAN6 216 aaKnown RBP16.07■□□□□ 0.16
TOP3A-213ENST00000582230 ZNF660Q6AZW8 331 aaPredicted RBP16.07■□□□□ 0.16
TOP3A-213ENST00000582230 OR2T10Q8NGZ9 312 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 AKR1E2Q96JD6 320 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 PTTG2Q9NZH5 202 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 C2CD3Q4AC94 2353 aa16.07■□□□□ 0.16
TOP3A-213ENST00000582230 IGHV3-72A0A0B4J1Y9 119 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 IGKV1D-13A0A0B4J2D9 117 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 OR5H14A6NHG9 310 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 M0R1X1 148 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 OR2F2O95006 317 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 CD3DP04234 171 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 IFNA6P05013 189 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 IGKV1-13P0DP09 117 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 MC5RP33032 325 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 HERV-K104P61576 105 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 TSPAN5P62079 268 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 MSMO1Q15800 293 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 ZNF79Q15937 498 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 DHRS7BQ6IAN0 325 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-213ENST00000582230 TMEM17Q86X19 198 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 TMEM219Q86XT9 240 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 Q8N402 240 aa16.06■□□□□ 0.16
TOP3A-213ENST00000582230 RBM14Q96PK6 669 aaKnown RBP16.06■□□□□ 0.16
TOP3A-213ENST00000582230 ZNF2Q9BSG1 426 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-213ENST00000582230 THAP7Q9BT49 309 aaPredicted RBP16.06■□□□□ 0.16
TOP3A-213ENST00000582230 MOSP00540 346 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 CD74P04233 296 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 TMEM11P17152 192 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 STEAP1BQ6NZ63 245 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 ARRDC1Q8N5I2 433 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-213ENST00000582230 OR5AN1Q8NGI8 311 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 BORCS5Q969J3 196 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 MOB3AQ96BX8 217 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 EAF1Q96JC9 268 aaPredicted RBP16.05■□□□□ 0.16
TOP3A-213ENST00000582230 CUBNO60494 3623 aa16.05■□□□□ 0.16
TOP3A-213ENST00000582230 M0QYG6 137 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 CHST1O43916 411 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 RAB3DO95716 219 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 HKR1P10072 659 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 FXYD4P59646 89 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 TAGLNQ01995 201 aaKnown RBP16.04■□□□□ 0.16
TOP3A-213ENST00000582230 ZNF45Q02386 682 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 MEF2DQ14814 521 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 DRAXINQ8NBI3 349 aaPredicted RBP16.04■□□□□ 0.16
TOP3A-213ENST00000582230 ZBTB34Q8NCN2 500 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 SECTM1Q8WVN6 248 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 ADTRPQ96IZ2 230 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 SLC25A33Q9BSK2 321 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 NPFFR1Q9GZQ6 430 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 SLC5A7Q9GZV3 580 aa16.04■□□□□ 0.16
TOP3A-213ENST00000582230 ANKRD20A5PA0PJZ0 165 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 RNF212BA8MTL3 300 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 H0YJW9 148 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 M0QZK8 103 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 IGLV2-14P01704 120 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 THBS3P49746 956 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 HNF4GQ14541 408 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 GDPD1Q8N9F7 314 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 ZNF383Q8NA42 475 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 OR8H1Q8NGG4 311 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 C5orf30Q96GV9 206 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 C19orf24Q9BVV8 132 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 TINAGL1Q9GZM7 467 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-213ENST00000582230 SRRQ9GZT4 340 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 C1RLQ9NZP8 487 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 WASHC3Q9Y3C0 194 aa16.03■□□□□ 0.16
TOP3A-213ENST00000582230 NDUFA7O95182 113 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms