RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 LINC00869P0C866 280 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 TMEM187Q14656 261 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 CALHM1Q8IU99 346 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 POC1AQ8NBT0 407 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 MARS2Q96GW9 593 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 SFRP2Q96HF1 295 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 NUDT3O95989 172 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 TAS2R60P59551 318 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 HES3Q5TGS1 186 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 SRIP30626 198 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 PRSS53Q2L4Q9 553 aa12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 YBX2Q9Y2T7 364 aaKnown RBP12.56□□□□□ -0.4
CSNK1D-217ENST00000581241 OR2A4O95047 310 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 HLA-DRB1P01911 266 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 PSG9Q00887 426 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 ZNF784Q8NCA9 323 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 OR2A7Q96R45 310 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 ZNF430Q9H8G1 570 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 FAM206AQ9NX38 181 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 TRIP11Q15643 1979 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 FXYD3Q14802 87 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 IGLV1-36A0A0B4J1U3 117 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 SELENOTP62341 195 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 MMDQ15546 238 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 TMEM78Q5T7P6 136 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 RABAC1Q9UI14 185 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 GCM2O75603 506 aaPredicted RBP12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 NUMA1Q14980 2115 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 CCDC144NLQ6NUI1 221 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 WFDC3Q8IUB2 231 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 OR10J6PQ8NGY7 276 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 SPSB4Q96A44 273 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 AMELYQ99218 206 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 SPINT1O43278 529 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 TTTY12Q9BZ98 90 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 FSCN3Q9NQT6 498 aa12.55□□□□□ -0.4
CSNK1D-217ENST00000581241 PGPA6NDG6 321 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 MGST3O14880 152 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 TSPAN2O60636 221 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 CD8AP01732 235 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 HERPUD1Q15011 391 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 FAM53AQ6NSI3 398 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 PPIAL4EA0A075B759 164 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 PPIAL4DF5H284 164 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 PPIAL4FP0DN26 164 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 NUBP1P53384 320 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 PPIAL4AQ9Y536 164 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 LOC105371267A0A1B0GV96 52 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 IGHMP01871 453 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 LGALS3P17931 250 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 SPEM2Q0P670 501 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 IGKV3-7A0A075B6H7 116 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 A0A1W2PP11 408 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 TNFRSF9Q07011 255 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 APCDD1LQ8NCL9 501 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 DIRC2Q96SL1 478 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 RGPD4Q7Z3J3 1758 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 ERGP11308 486 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 JOSD1Q15040 202 aaPredicted RBP12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 TMEM177Q53S58 311 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 SAXO1Q8IYX7 474 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 OR10AG1Q8NH19 301 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 MIEN1Q9BRT3 115 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
CSNK1D-217ENST00000581241 CARHSP1Q9Y2V2 147 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 TTC3P53804 2025 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 UBE2L6O14933 153 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 TRIP6Q15654 476 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 ZNF506Q5JVG8 444 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 C1orf210Q8IVY1 113 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 DYNLRB2Q8TF09 96 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 ADAMTSL1Q8N6G6 1762 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 PIN1P1O15428 100 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 PCP4P48539 62 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 ARF6P62330 175 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 RPL31P62899 125 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 COPS9Q8WXC6 57 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 G6PC2Q9NQR9 355 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 MC5RP33032 325 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 UCP2P55851 309 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 KRTCAP3Q53RY4 240 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 C19orf54Q5BKX5 351 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 Q5BKY6 102 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 TMEM70Q9BUB7 260 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 AKIRIN1Q9H9L7 192 aaPredicted RBP12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 F11RQ9Y624 299 aaKnown RBP12.53□□□□□ -0.4
CSNK1D-217ENST00000581241 ZNF831Q5JPB2 1677 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms