RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
MKS1-210ENST00000581180 ANKRD20A5PA0PJZ0 165 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 J3QRK9 145 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 IGLV2-14P01704 120 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 RNASE1P07998 156 aaKnown RBP12.12□□□□□ -0.47
MKS1-210ENST00000581180 CSF1P09603 554 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 ARHGDIBP52566 201 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
MKS1-210ENST00000581180 FBLN7Q53RD9 439 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 STEAP1BQ6NZ63 245 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 CCBE1Q6UXH8 406 aaPredicted RBP12.12□□□□□ -0.47
MKS1-210ENST00000581180 THNSL2Q86YJ6 484 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 GDPD1Q8N9F7 314 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 OR4D10Q8NGI6 311 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 MOB3AQ96BX8 217 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 ZNF2Q9BSG1 426 aaPredicted RBP12.12□□□□□ -0.47
MKS1-210ENST00000581180 MRPL20Q9BYC9 149 aaKnown RBP12.12□□□□□ -0.47
MKS1-210ENST00000581180 CHIAQ9BZP6 476 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 ABCB10Q9NRK6 738 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 VPREB3Q9UKI3 123 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 TCF19Q9Y242 345 aa12.12□□□□□ -0.47
MKS1-210ENST00000581180 RBM7Q9Y580 266 aaKnown RBP12.12□□□□□ -0.47
MKS1-210ENST00000581180 PLXNB1O43157 2135 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 ATRQ13535 2644 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 A6NDX4 124 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 RAB3DO95716 219 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 ZNF735P0CB33 412 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 CD24P25063 80 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 CD1BP29016 333 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 LSAMPQ13449 338 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 EBI3Q14213 229 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 BAK1Q16611 211 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
MKS1-210ENST00000581180 MOB3BQ86TA1 216 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 ZNF645Q8N7E2 425 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 OR6F1Q8NGZ6 308 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 TNFRSF19Q9NS68 423 aa12.11□□□□□ -0.47
MKS1-210ENST00000581180 IGHV3-72A0A0B4J1Y9 119 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 BTBD17A6NE02 478 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 SLC22A5O76082 557 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 SNRNP70P08621 437 aaKnown RBP12.1□□□□□ -0.47
MKS1-210ENST00000581180 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 FXYD4P59646 89 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 TSPAN5P62079 268 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 EIF4EBP1Q13541 118 aaPredicted RBP12.1□□□□□ -0.47
MKS1-210ENST00000581180 KLF9Q13886 244 aaPredicted RBP12.1□□□□□ -0.47
MKS1-210ENST00000581180 MSMO1Q15800 293 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 LY6EQ16553 131 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 C16orf87Q6PH81 154 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 LHFPL1Q86WI0 220 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 OR4C16Q8NGL9 310 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 SECTM1Q8WVN6 248 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 FXYD6Q9H0Q3 95 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 CCL28Q9NRJ3 127 aa12.1□□□□□ -0.47
MKS1-210ENST00000581180 TNCP24821 2201 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 OR5H14A6NHG9 310 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 M0R1X1 148 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 AKAIN1P0CW23 69 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 LINC00205P59089 165 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 HERV-K104P61576 105 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 MEF2DQ14814 521 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 AADACL3Q5VUY0 350 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 ZNF383Q8NA42 475 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 OR5AN1Q8NGI8 311 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 ZFAND2BQ8WV99 257 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 CAPSLQ8WWF8 208 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 S100ZQ8WXG8 99 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
MKS1-210ENST00000581180 SLC5A7Q9GZV3 580 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 PITPNC1Q9UKF7 332 aa12.09□□□□□ -0.47
MKS1-210ENST00000581180 H0YJW9 148 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 CHST1O43916 411 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 GPR137BO60478 399 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 IGKV1D-33P01593 117 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 IGKV1-33P01594 117 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 IFNA6P05013 189 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 FAM106CPP0CH98 169 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 GNRHRP30968 328 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 DUTP33316 252 aaKnown RBP12.08□□□□□ -0.48
MKS1-210ENST00000581180 UCP3P55916 312 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 FAAP20Q6NZ36 180 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 GLDNQ6ZMI3 551 aaPredicted RBP12.08□□□□□ -0.48
MKS1-210ENST00000581180 LIAT1Q6ZQX7 453 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 TMEM17Q86X19 198 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 TMEM219Q86XT9 240 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 Q8N6K4 173 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
MKS1-210ENST00000581180 ZBTB34Q8NCN2 500 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 DDB2Q92466 427 aa12.08□□□□□ -0.48
MKS1-210ENST00000581180 EAF1Q96JC9 268 aaPredicted RBP12.08□□□□□ -0.48
MKS1-210ENST00000581180 FAM181BA6NEQ2 426 aa12.07□□□□□ -0.48
MKS1-210ENST00000581180 LINC00473A8K010 186 aa12.07□□□□□ -0.48
MKS1-210ENST00000581180 AMY2AP04746 511 aa12.07□□□□□ -0.48
MKS1-210ENST00000581180 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms