RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 ARIH2OSQ8N7S6 290 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 GPR26Q8NDV2 337 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 OR10G9Q8NGN4 311 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 OR2A1Q8NGT9 310 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 LMX1AQ8TE12 382 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 LRRC29Q8WV35 223 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 ASB13Q8WXK3 278 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 IMP4Q96G21 291 aaKnown RBP2.9□□□□□ -1.94
NF1-220ENST00000581113 MCEEQ96PE7 176 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 KLF6Q99612 283 aaPredicted RBP2.9□□□□□ -1.94
NF1-220ENST00000581113 SRXN1Q9BYN0 137 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 ALX4Q9H161 411 aaPredicted RBP2.9□□□□□ -1.94
NF1-220ENST00000581113 RPF2Q9H7B2 306 aaKnown RBP2.9□□□□□ -1.94
NF1-220ENST00000581113 TMEM138Q9NPI0 162 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 ARMC1Q9NVT9 282 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 PRO0628Q9UI54 55 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 ANXA10Q9UJ72 324 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 DKKL1Q9UK85 242 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 SLC7A11Q9UPY5 501 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 TRAPPC4Q9Y296 219 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 DMXL2Q8TDJ6 3036 aa2.9□□□□□ -1.94
NF1-220ENST00000581113 ANKRD11Q6UB99 2663 aaPredicted RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 COL5A1P20908 1838 aaPredicted RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 PLXNB3Q9ULL4 1909 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 ACACAQ13085 2346 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 IGLV1-36A0A0B4J1U3 117 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 ZNF98A6NK75 572 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 OR11H12B2RN74 326 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 TSTD3H0UI37 97 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 RDH16O75452 317 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 CXCL3P19876 107 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 CXCR1P25024 350 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 PAX6P26367 422 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 PPICP45877 212 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 GPR6P46095 362 aaPredicted RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 PPOXP50336 477 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 HNRNPA3P51991 378 aaKnown RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 TPI1P60174 286 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 ESRRGP62508 458 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 BTN3A2P78410 334 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 RUNX1Q01196 453 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 IFITM2Q01629 132 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 DEFB133Q30KQ1 61 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 KRTAP13-3Q3SY46 172 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 LIN52Q52LA3 116 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 FAM220AQ7Z4H9 259 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 MKXQ8IYA7 352 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 C6orf223Q8N319 242 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 PNKDQ8N490 385 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 TMEM86BQ8N661 226 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 LINC01555Q8NAE3 123 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 OR11H1Q8NG94 326 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 OR4F15Q8NGB8 312 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 OR9A2Q8NGT5 310 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 OR11H2Q8NH07 326 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 COQ8AQ8NI60 647 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 RNASE11Q8TAA1 199 aaKnown RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 PIFOQ8TCI5 191 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 C7orf33Q8WU49 177 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 TMEM101Q96IK0 257 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 LINC00477Q96M19 166 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 SPACA5Q96QH8 159 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 PFDN5Q99471 154 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 KCTD14Q9BQ13 255 aaPredicted RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 AIF1LQ9BQI0 150 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 EBF4Q9BQW3 602 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 SLC25A39Q9BZJ4 359 aaPredicted RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 OR11A1Q9GZK7 315 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 TCEAL2Q9H3H9 227 aaPredicted RBP2.9□□□□□ -1.95
NF1-220ENST00000581113 WFDC1Q9HC57 220 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 CALYQ9NYX4 217 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 TREM2Q9NZC2 230 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 VAX2Q9UIW0 290 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 PKIGQ9Y2B9 76 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 SLC35A3Q9Y2D2 325 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 U3KQA8 63 aa2.9□□□□□ -1.95
NF1-220ENST00000581113 CELSR3Q9NYQ7 3312 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 PLXNA2O75051 1894 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 DSPP15924 2871 aaKnown RBP2.89□□□□□ -1.95
NF1-220ENST00000581113 KNTC1P50748 2209 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 GOLGA4Q13439 2230 aaKnown RBP2.89□□□□□ -1.95
NF1-220ENST00000581113 URB1O60287 2271 aaKnown RBP2.89□□□□□ -1.95
NF1-220ENST00000581113 IGHV1OR21-1A0A087WYE8 117 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 A0A1W2PRG6 482 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 RBFOX3A6NFN3 312 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 ATP6V1G2-DDX39BF2Z307 99 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 C15orf65H3BRN8 121 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 H7C417 338 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 GPR31O00270 319 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 ZNF207O43670 478 aaKnown RBP2.89□□□□□ -1.95
NF1-220ENST00000581113 DHRS3O75911 302 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 SOX14O95416 240 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 HAND1O96004 215 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 GIPP09681 153 aaPredicted RBP2.89□□□□□ -1.95
NF1-220ENST00000581113 ZNF708P17019 499 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 CXCL2P19875 107 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 HTR1EP28566 365 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 S100GP29377 79 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 MIPP30301 263 aa2.89□□□□□ -1.95
NF1-220ENST00000581113 MYCNOSP40205 109 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms