RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 A0A0A6YYJ9 748 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 IGKV1D-13A0A0B4J2D9 117 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 A0A0U1RQK1 487 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 CENPXA8MT69 81 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 M0QYG6 137 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 HSD17B6O14756 317 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 IGHV3-7P01780 117 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 OR8U9P0C7N5 309 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 IGKV1-13P0DP09 117 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 GPR12P47775 334 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 PRB3Q04118 309 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-203ENST00000580986 RUSC1-AS1Q66K80 236 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 ZNF57Q68EA5 555 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-203ENST00000580986 FAM53AQ6NSI3 398 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-203ENST00000580986 LHFPL4Q7Z7J7 247 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 TGIF2LXQ8IUE1 241 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 PDZD9Q8IXQ8 264 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 SLC38A6Q8IZM9 456 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 LYG1Q8N1E2 194 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 TMEM86BQ8N661 226 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 BVESQ8NE79 360 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 OR8U1Q8NH10 309 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 TOMM40LQ969M1 308 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 ADTRPQ96IZ2 230 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 SCGB3A2Q96PL1 93 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 SLC25A21Q9BQT8 299 aaPredicted RBP8.4□□□□□ -1.06
CCDC47-203ENST00000580986 FXYD6Q9H0Q3 95 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 RBM7Q9Y580 266 aaKnown RBP8.4□□□□□ -1.06
CCDC47-203ENST00000580986 POMT1Q9Y6A1 747 aa8.4□□□□□ -1.06
CCDC47-203ENST00000580986 IGHV1-3A0A0C4DH29 117 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 A0A1W2PPE3 182 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 A0A1W2PPI3 338 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 OR5H14A6NHG9 310 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 PROP1O75360 226 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 IGLV2-14P01704 120 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 CD1BP29016 333 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 BRS3P32247 399 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 ASAH1Q13510 395 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 EIF4EBP1Q13541 118 aaPredicted RBP8.39□□□□□ -1.07
CCDC47-203ENST00000580986 SSX2Q16385 188 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 Q6YL49 198 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 ZNF66Q6ZN08 573 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 THNSL2Q86YJ6 484 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 DRAM1Q8N682 238 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 TCTEX1D1Q8N7M0 179 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 OR56B4Q8NH76 319 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 OR5R1Q8NH85 324 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 ABHD14BQ96IU4 210 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 HSD17B10Q99714 261 aaKnown RBP8.39□□□□□ -1.07
CCDC47-203ENST00000580986 RSRP1Q9BUV0 290 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 FAM212BQ9NTI7 297 aaPredicted RBP8.39□□□□□ -1.07
CCDC47-203ENST00000580986 SDHAF2Q9NX18 166 aa8.39□□□□□ -1.07
CCDC47-203ENST00000580986 FN1P02751 2386 aaKnown RBP8.39□□□□□ -1.07
CCDC47-203ENST00000580986 IGHV3OR16-10A0A075B7F0 116 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 CLDN34H7C241 214 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 J3QRK9 145 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 PLA2G10O15496 165 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 LYRM1O43325 122 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 B3GALNT1O75752 331 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 S100GP29377 79 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 GNRHRP30968 328 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 MC5RP33032 325 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 THBS3P49746 956 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 RAB13P51153 203 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 RND3P61587 244 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 EBI3Q14213 229 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 RBMS2Q15434 407 aaKnown RBP8.38□□□□□ -1.07
CCDC47-203ENST00000580986 LRRC75BQ2VPJ9 315 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 DEFB112Q30KQ8 113 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 IL17RELQ6ZVW7 336 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 CMTM1Q8IZ96 169 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 DYNAPQ8N1N2 210 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 ZDHHC22Q8N966 263 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 OR5AN1Q8NGI8 311 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 OR51S1Q8NGJ8 323 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 OR13C8Q8NGS7 320 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 ZFAND1Q8TCF1 268 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 SECTM1Q8WVN6 248 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 SSMEM1Q8WWF3 244 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 CFHR4Q92496 578 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 MRGPRFQ96AM1 343 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 ZNF48Q96MX3 618 aaPredicted RBP8.38□□□□□ -1.07
CCDC47-203ENST00000580986 NABP2Q9BQ15 211 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 SLC5A7Q9GZV3 580 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 DPAGT1Q9H3H5 408 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 COPZ2Q9P299 210 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 MTORP42345 2549 aa8.38□□□□□ -1.07
CCDC47-203ENST00000580986 A0A1W2PRD5 423 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 A0A1W2PRF3 423 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 A0A1W2PRM7 423 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 GPR31O00270 319 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 RBFOX2O43251 390 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 CTSDP07339 412 aaPredicted RBP8.37□□□□□ -1.07
CCDC47-203ENST00000580986 CT45A6P0DMU7 189 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 CT45A5P0DMU8 189 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 CT45A7P0DMV0 189 aa8.37□□□□□ -1.07
CCDC47-203ENST00000580986 RRASP10301 218 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms