RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TVP23BQ9NYZ1 205 aa5.61□□□□□ -1.51
SMARCE1-217ENST00000580654 METTL1Q9UBP6 276 aaKnown RBP5.61□□□□□ -1.51
SMARCE1-217ENST00000580654 UBQLN2Q9UHD9 624 aa5.61□□□□□ -1.51
SMARCE1-217ENST00000580654 ZNF230Q9UIE0 474 aaPredicted RBP5.61□□□□□ -1.51
SMARCE1-217ENST00000580654 A0A1W2PQL4 384 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 METTL15A6NJ78 407 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 PPP5D1E7EU14 171 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 H0YJW9 148 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 M0R129 80 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 AIPO00170 330 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 GABRPO00591 440 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 GEMIN2O14893 280 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 PRKYO43930 277 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 SNX3O60493 162 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 HLA-AP01891 365 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 RBMY1A1P0DJD3 496 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 INAFM2P0DMQ5 153 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 OSMP13725 252 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 RPL35AP18077 110 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 ATP6V1B2P21281 511 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 PPP1CCP36873 323 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 NANOS3P60323 173 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 ZNF674Q2M3X9 581 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 TMEM30BQ3MIR4 351 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 SYT6Q5T7P8 510 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 ZNF57Q68EA5 555 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 CDPF1Q6NVV7 123 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 ASCL4Q6XD76 172 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 DRAXINQ8NBI3 349 aaPredicted RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 OR4K15Q8NH41 348 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 GIPC3Q8TF64 312 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 GHSRQ92847 366 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 MRPS24Q96EL2 167 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 ATP6V1G3Q96LB4 118 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 IFI27L2Q9H2X8 130 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 REEP1Q9H902 201 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 MAP6D1Q9H9H5 199 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 OR2S2Q9NQN1 319 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 ST3GAL6Q9Y274 331 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 FAT1Q14517 4588 aa5.6□□□□□ -1.51
SMARCE1-217ENST00000580654 HMCN2Q8NDA2 5059 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 TCRBV5S2A0A599 114 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 TMEM213A2RRL7 107 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 FAM90A23PA8MXZ1 464 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 C11orf94C9JXX5 98 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 LGALS9O00182 355 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 SLC22A1O15245 554 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 SPINT2O43291 252 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 OR7C1O76099 320 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 ISG15P05161 165 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 OCM2P0CE71 109 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 OCMP0CE72 109 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 RCC1P18754 421 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 CCR9P51686 369 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 RBM11P57052 281 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 PJVKQ0ZLH3 352 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 EXOSC2Q13868 293 aaKnown RBP5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 ODF3L2Q3SX64 289 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 RPL39P5Q59GN2 51 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 NHLRC3Q5JS37 347 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 AADACL4Q5VUY2 407 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 TMEM244Q5VVB8 128 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 LPCAT4Q643R3 524 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 PVRIGQ6DKI7 326 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 HS3ST5Q8IZT8 346 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 GAPTQ8N292 157 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 OR2G2Q8NGZ5 317 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 MISP3Q96FF7 219 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 RARRES2Q99969 163 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 AKIP1Q9NQ31 210 aa5.59□□□□□ -1.51
SMARCE1-217ENST00000580654 IGLV2-18A0A075B6J9 118 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 LINC00854A0A1B0GVQ3 168 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 OR5H14A6NHG9 310 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 H3BNX3 289 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 SULT1B1O43704 296 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 RBBP9O75884 186 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 SULT1C4O75897 302 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 OR2C1O95371 312 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 PRH1P02810 166 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 IGKV1-16P04430 117 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 GSTP1P09211 210 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 APELAP0DMC3 54 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 ARL3P36405 182 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 LINC00205P59089 165 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 EFNB1P98172 346 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 RIPK1Q13546 671 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 MRGPRG-AS1Q2M3A8 158 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 ANKRD55Q3KP44 614 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 TP53I3Q53FA7 332 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 LY6G6FQ5SQ64 297 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 ATAD3CQ5T2N8 411 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 FAM71F2Q6NXP2 309 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 BTNL8Q6UX41 500 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 CYP2R1Q6VVX0 501 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 UXS1Q8NBZ7 420 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 ADAD2Q8NCV1 583 aaKnown RBP5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 OR5AN1Q8NGI8 311 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 OR13C3Q8NGS6 347 aa5.58□□□□□ -1.52
SMARCE1-217ENST00000580654 OR11H2Q8NH07 326 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms