RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 BSXQ3C1V8 233 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 Q3ZCU0 254 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 WDR25Q64LD2 544 aaPredicted RBP4.48□□□□□ -1.69
CDH8-206ENST00000580044 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 SPNS3Q6ZMD2 512 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 P4HA3Q7Z4N8 544 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 MRPL52Q86TS9 123 aaKnown RBP4.48□□□□□ -1.69
CDH8-206ENST00000580044 ODF3L1Q8IXM7 274 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 FAM58AQ8N1B3 248 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 WDR31Q8NA23 367 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 BEND2Q8NDZ0 799 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 OR1P1Q8NH06 330 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 OR51H1Q8NH63 302 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 SAP25Q8TEE9 199 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 TMEM170AQ8WVE7 144 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 TAF15Q92804 592 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDH8-206ENST00000580044 LHX4Q969G2 390 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 TMEM18Q96B42 140 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 C14orf144Q96I85 54 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 ZNF845Q96IR2 970 aaPredicted RBP4.48□□□□□ -1.69
CDH8-206ENST00000580044 HIST1H2BLQ99880 126 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 TXNDC17Q9BRA2 123 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 ABHD14AQ9BUJ0 271 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 TMEM147Q9BVK8 224 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 RTL8AQ9BWD3 113 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 MRPL37Q9BZE1 423 aaKnown RBP4.48□□□□□ -1.69
CDH8-206ENST00000580044 OR51I2Q9H344 312 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 KCNIP2Q9NS61 270 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 SLC39A9Q9NUM3 307 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 MTCH1Q9NZJ7 389 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 ZNF581Q9P0T4 197 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 CACNG5Q9UF02 275 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 OR14J1Q9UGF5 321 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 PRSS50Q9UI38 385 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 U3KQA8 63 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 SEC16AO15027 2179 aa4.48□□□□□ -1.69
CDH8-206ENST00000580044 TRAV9-1A0A075B6T8 112 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 IGKV1-6A0A0C4DH72 117 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 C5orf49A4QMS7 147 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 LRRC3CA6NJW4 275 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 F6UZH7 168 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 PHOX2AO14813 284 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 SLC31A2O15432 143 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 PDE6DO43924 150 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 MPDU1O75352 247 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 TRAPPC6AO75865 159 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 CELA2AP08217 269 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 PSG2P11465 335 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 MYF5P13349 255 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 COX5AP20674 150 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 GDF1P27539 372 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 GALR1P47211 349 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 RPP30P78346 268 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 ARF1P84077 181 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 MRPL49Q13405 166 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 GAMTQ14353 236 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 ADIRFQ15847 76 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 GABRA6Q16445 453 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 TBR1Q16650 682 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 IQCJQ1A5X6 159 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 C9orf152Q5JTZ5 239 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 TMEM200BQ69YZ2 307 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 LCN15Q6UWW0 184 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 TMEM14EPQ6UXP3 125 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 NUFIP2Q7Z417 695 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 YRDCQ86U90 279 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 ZNF709Q8N972 641 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 CPEB3Q8NE35 698 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 OR51G1Q8NGK1 321 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 OR2T10Q8NGZ9 312 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 OR4X1Q8NH49 305 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 ABHD5Q8WTS1 349 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 APH1AQ96BI3 265 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 SNX22Q96L94 193 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 FAM173AQ9BQD7 235 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 ZPBPQ9BS86 351 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 RSG1Q9BU20 258 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 RBKSQ9H477 322 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 ZNF665Q9H7R5 613 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 OCIAD1Q9NX40 245 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 KCNIP1Q9NZI2 227 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 ABI3Q9P2A4 366 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 HSPB7Q9UBY9 170 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 ERRFI1Q9UJM3 462 aaPredicted RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 KCNS2Q9ULS6 477 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 TP53TG5Q9Y2B4 290 aa4.47□□□□□ -1.69
CDH8-206ENST00000580044 RBM7Q9Y580 266 aaKnown RBP4.47□□□□□ -1.69
CDH8-206ENST00000580044 ARHGAP21Q5T5U3 1957 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 TRAV24A0A0B4J272 114 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 UBE2L5PA0A1B0GUS4 154 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 XKRY2A2RUG3 117 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 TMEM210A6NLX4 147 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 ZNF891A8MT65 544 aaPredicted RBP4.46□□□□□ -1.7
CDH8-206ENST00000580044 G3V3Y1 287 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 H3BP45 60 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 K7ESF4 209 aa4.46□□□□□ -1.7
CDH8-206ENST00000580044 NTN3O00634 580 aaPredicted RBP4.46□□□□□ -1.7
CDH8-206ENST00000580044 SH2D1BO14796 132 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms