RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 TTC9CQ8N5M4 171 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 ANKRD29Q8N6D5 301 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 FNDC9Q8TBE3 224 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 MRPS24Q96EL2 167 aaKnown RBP5.27□□□□□ -1.57
COPS3-216ENST00000579716 WASHC3Q9Y3C0 194 aa5.27□□□□□ -1.57
COPS3-216ENST00000579716 N4BP2Q86UW6 1770 aaPredicted RBP5.27□□□□□ -1.57
COPS3-216ENST00000579716 CASKIN1Q8WXD9 1431 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 A0A0B4J2A0 478 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 C7orf71A4D174 169 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 GGT3PA6NGU5 568 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 GGTLC3B5MD39 225 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 LINC01619G3V211 115 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 NCR1O76036 304 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 IGKV1D-16P01601 117 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 CTSDP07339 412 aaPredicted RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 CD14P08571 375 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 MMP7P09237 267 aaPredicted RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 BCL2P10415 239 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 GM2AP17900 193 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 PLA2G5P39877 138 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 SEC61A1P61619 476 aaKnown RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 ZNF85Q03923 595 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 LOXL1Q08397 574 aaPredicted RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 TMEM30BQ3MIR4 351 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 TTC32Q5I0X7 151 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 ZNF506Q5JVG8 444 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 C10orf91Q5T1B1 145 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 ZNF324BQ6AW86 544 aaPredicted RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 ZNF793Q6ZN11 406 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 ERMAPQ96PL5 475 aaPredicted RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 GGTLC1Q9BX51 225 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 GNB1LQ9BYB4 327 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 SPRY4Q9C004 299 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 PRSS22Q9GZN4 317 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 ESM1Q9NQ30 184 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 ZNF331Q9NQX6 463 aaPredicted RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 RPRMQ9NS64 109 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 PCYOX1Q9UHG3 505 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 SHPKQ9UHJ6 478 aa5.26□□□□□ -1.57
COPS3-216ENST00000579716 MTCL1Q9Y4B5 1905 aaKnown RBP5.26□□□□□ -1.57
COPS3-216ENST00000579716 PLXND1Q9Y4D7 1925 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 RTEL1-TNFRSF6BF6WH68 1400 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 ABCC5O15440 1437 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 hCG_1818297A0A087WSY0 165 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 DHRS12A0PJE2 317 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 C5orf63A6NC05 138 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 KNCNA6PVL3 124 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 A8MT66 165 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 FNDC10F2Z333 226 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 H7BYZ3 331 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 J3QT63 122 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 FGF17O60258 216 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 NPIPB7O75200 414 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 NDUFS7O75251 213 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 DUS4LO95620 317 aaKnown RBP5.25□□□□□ -1.57
COPS3-216ENST00000579716 LINC00694P0DN24 101 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 GZMBP10144 247 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 CCR2P41597 374 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 LPAR6P43657 344 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 RARRES1P49788 294 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 RBM11P57052 281 aaKnown RBP5.25□□□□□ -1.57
COPS3-216ENST00000579716 TAS2R46P59540 309 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 ZNF92Q03936 586 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 Q499Y3 187 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 SPANXN4Q5MJ08 99 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 HIST3H2BBQ8N257 126 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 OR1J1Q8NGS3 322 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 RHOXF1Q8NHV9 184 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 SSC4DQ8WTU2 575 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 FGF11Q92914 225 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 SFXN3Q9BWM7 321 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 BANF2Q9H503 90 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 KLK11Q9UBX7 282 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 POMPQ9Y244 141 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 SIGLEC7Q9Y286 467 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 ZNF257Q9Y2Q1 563 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 ORC6Q9Y5N6 252 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 ZNF106Q9H2Y7 1883 aaKnown RBP5.25□□□□□ -1.57
COPS3-216ENST00000579716 FOCADQ5VW36 1801 aa5.25□□□□□ -1.57
COPS3-216ENST00000579716 TECPR2O15040 1411 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 RIC1Q4ADV7 1423 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 MAPKBP1O60336 1514 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 SAA2-SAA4A0A096LPE2 208 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 ZNF724A8MTY0 619 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 NUDT2P50583 147 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 DAD1P61803 113 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 RPS24P62847 133 aaKnown RBP5.24□□□□□ -1.57
COPS3-216ENST00000579716 HLA-DRB3P79483 266 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 SLC38A11Q08AI6 406 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 TMEM187Q14656 261 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 MEIG1Q5JSS6 88 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 ATP1A1-AS1Q5TC04 95 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 TMEM179BQ7Z7N9 219 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 EXOC3-AS1Q8N2X6 119 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 TEX29Q8N6K0 151 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 YIPF7Q8N8F6 280 aa5.24□□□□□ -1.57
COPS3-216ENST00000579716 BPIFB6Q8NFQ5 453 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms