RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 VDAC1P21796 283 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 GPR12P47775 334 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 RAB7AP51149 207 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 LOXL3P58215 753 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 RPL31P62899 125 aaKnown RBP14□□□□□ -0.17
SREBF1-218ENST00000578469 RAB32Q13637 225 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 ZNF345Q14585 488 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 LYPD2Q6UXB3 125 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 ZNF66Q6ZN08 573 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 OR8H1Q8NGG4 311 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 H1FXQ92522 213 aaKnown RBP14□□□□□ -0.17
SREBF1-218ENST00000578469 TIMD4Q96H15 378 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 LINC00574Q9H8X3 128 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 KIAA2026Q5HYC2 2103 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 DNHD1Q96M86 4753 aa14□□□□□ -0.17
SREBF1-218ENST00000578469 RAI1Q7Z5J4 1906 aaPredicted RBP14□□□□□ -0.17
SREBF1-218ENST00000578469 DSCAMO60469 2012 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 A6NNC1 897 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 DVL1O14640 695 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 ST8SIA5O15466 376 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 RP2O75695 350 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 SOD3P08294 240 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 AP2S1P53680 142 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-218ENST00000578469 KCNRGQ8N5I3 272 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 RNASE11Q8TAA1 199 aaKnown RBP13.99□□□□□ -0.17
SREBF1-218ENST00000578469 RAB1CQ92928 201 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 RAB39BQ96DA2 213 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 HSD17B10Q99714 261 aaKnown RBP13.99□□□□□ -0.17
SREBF1-218ENST00000578469 RNF126Q9BV68 326 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 UBTD1Q9HAC8 227 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 ARFGEF3Q5TH69 2177 aa13.99□□□□□ -0.17
SREBF1-218ENST00000578469 ROS1P08922 2347 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 KANTRA0A1W2PQU2 76 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 LYNX1G3V0Z9 82 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 ATG12O94817 140 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 SCGB1D2O95969 90 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 LYNX1P0DP58 116 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 OMGP23515 440 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 NFYBP25208 207 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 FAM53AQ6NSI3 398 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-218ENST00000578469 TCF23Q7RTU1 214 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 ABHD14BQ96IU4 210 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 ZNF714Q96N38 554 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 FAM212BQ9NTI7 297 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-218ENST00000578469 SDHAF2Q9NX18 166 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 GAB2Q9UQC2 676 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 LAMP3Q9UQV4 416 aa13.98□□□□□ -0.17
SREBF1-218ENST00000578469 LSM5Q9Y4Y9 91 aaKnown RBP13.98□□□□□ -0.17
SREBF1-218ENST00000578469 FBN3Q75N90 2809 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 TRBV23-1A0A0A0MS06 115 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 H0YIZ8 118 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 GPR37O15354 613 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 IFNA7P01567 189 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 IGHV2-70P01814 119 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 SLC25A6P12236 298 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 DAOP14920 347 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 Q3ZCU0 254 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 FOXRED2Q8IWF2 684 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 FGFRL1Q8N441 504 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 OR1S1Q8NH92 325 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 TCTEX1D2Q8WW35 142 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
SREBF1-218ENST00000578469 AGMATQ9BSE5 352 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 ABHD14AQ9BUJ0 271 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 GSX1Q9H4S2 264 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-218ENST00000578469 HEXA-AS1Q9H8Q6 139 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 C19orf12Q9NSK7 152 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 OR5AC2Q9NZP5 309 aa13.97□□□□□ -0.17
SREBF1-218ENST00000578469 RNF222A6NCQ9 220 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 ST8SIA3O43173 380 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 DEDDO75618 318 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 LPAR6P43657 344 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 EIF4EBP1Q13541 118 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-218ENST00000578469 NMSQ5H8A3 153 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 TEX261Q6UWH6 196 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 SLC51BQ86UW2 128 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-218ENST00000578469 OR4D5Q8NGN0 318 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 CD300LFQ8TDQ1 290 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 RRNAD1Q96FB5 475 aaKnown RBP13.96□□□□□ -0.17
SREBF1-218ENST00000578469 CTSZQ9UBR2 303 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 MIOXQ9UGB7 285 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 RPUSD1Q9UJJ7 312 aaKnown RBP13.96□□□□□ -0.17
SREBF1-218ENST00000578469 U3KQ87 197 aa13.96□□□□□ -0.17
SREBF1-218ENST00000578469 NSD1Q96L73 2696 aaPredicted RBP13.96□□□□□ -0.18
SREBF1-218ENST00000578469 A0A1B0GU03 582 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 E5RGE8 158 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 K7EPK0 472 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 PPIHO43447 177 aaKnown RBP13.95□□□□□ -0.18
SREBF1-218ENST00000578469 BCL2L11O43521 198 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 MBPP02686 304 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-218ENST00000578469 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-218ENST00000578469 AKR1C2P52895 323 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF273Q14593 569 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 TMEM155Q4W5P6 130 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 ZNF585BQ52M93 769 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 PRAMEF5Q5TYX0 476 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 TMEM200BQ69YZ2 307 aa13.95□□□□□ -0.18
SREBF1-218ENST00000578469 HEPN1Q6WQI6 88 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms