RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SORL1Q92673 2214 aa0.68□□□□□ -2.3
TOP2A-202ENST00000577541 DSCAML1Q8TD84 2053 aa0.68□□□□□ -2.3
TOP2A-202ENST00000577541 MUC21A0A0G2JKD1 596 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 MUC21A0A140T8X8 626 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 EVPLLA8MZ36 301 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 GOLGA8KD6RF30 607 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 GOLGA8MH3BSY2 632 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 TRAPPC3O43617 180 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 HPGDSO60760 199 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 HBZP02008 142 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 IL6P05231 212 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR4A8P0C604 315 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 F8A1P23610 371 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 CRHBPP24387 322 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 AGTR1P30556 359 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR1E2P47887 323 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 BLVRAP53004 296 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 CTBP2P56545 445 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 CXCR4P61073 352 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 MLLT11Q13015 90 aaPredicted RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 PPP1R1AQ13522 171 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 GNA13Q14344 377 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 JOSD1Q15040 202 aaPredicted RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 MAPK14Q16539 360 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 DNAL1Q4LDG9 190 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 SCGB1D4Q6XE38 83 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 TMPPEQ6ZT21 453 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 SPATA24Q86W54 205 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 SLC13A5Q86YT5 568 aaPredicted RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 FAM9CQ8IZT9 166 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 DAND5Q8N907 189 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 TMEM161BQ8NDZ6 487 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR52E4Q8NGH9 312 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR4C16Q8NGL9 310 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR2T4Q8NH00 348 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR4K13Q8NH42 304 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR10A6Q8NH74 314 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 OR5K1Q8NHB7 308 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ERMNQ8TAM6 284 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 RPS4Y2Q8TD47 263 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ASB13Q8WXK3 278 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 FGF13Q92913 245 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 LRRC45Q96CN5 670 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 SMIM19Q96E16 107 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ABHD14BQ96IU4 210 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 TIPINQ9BVW5 301 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ZNF471Q9BX82 626 aaPredicted RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 PECRQ9BY49 303 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 SLC22A4Q9H015 551 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 METTL9Q9H1A3 318 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 CHMP4BQ9H444 224 aaKnown RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 PARVAQ9NVD7 372 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ZNHIT6Q9NWK9 470 aaKnown RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 RBM7Q9Y580 266 aaKnown RBP0.67□□□□□ -2.3
TOP2A-202ENST00000577541 SNX10Q9Y5X0 201 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ALG5Q9Y673 324 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 A0A1W2PP64 1363 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 ABCC12Q96J65 1359 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 KIF15Q9NS87 1388 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
TOP2A-202ENST00000577541 COL11A1P12107 1806 aaPredicted RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 ARHGAP32A7KAX9 2087 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 ICE1Q9Y2F5 2266 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TRGV4A0A0C4DH28 118 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 C11orf86A6NJI1 115 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 OR5K4A6NMS3 321 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 OR11H12B2RN74 326 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 H3BSA7 217 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TP53I11O14683 189 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 OVOL1O14753 267 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 CETN3O15182 167 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 DENRO43583 198 aaKnown RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TYMSP04818 313 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 ARL14EPLP0DKL9 152 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 SLC25A16P16260 332 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 DAD1P61803 113 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 SLC35A2P78381 396 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 ZNF117Q03924 483 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 C1orf194Q5T5A4 169 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 ZNF322Q6U7Q0 402 aaPredicted RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 Q6ZRN7 208 aaPredicted RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 NAA40Q86UY6 237 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 GPHB5Q86YW7 130 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 BAP18Q8IXM2 172 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 UMODL1-AS1Q8N2C9 162 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TMEM251Q8N6I4 163 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 OR8K1Q8NGG5 319 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 OR11H2Q8NH07 326 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 C16orf78Q8WTQ4 265 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 Q8WTZ3 238 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TLCD1Q96CP7 247 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 SMIM12Q96EX1 92 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 SFRP2Q96HF1 295 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 ZNF625Q96I27 306 aaPredicted RBP0.66□□□□□ -2.3
TOP2A-202ENST00000577541 KCTD7Q96MP8 289 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 NMNAT3Q96T66 252 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 DCUN1D5Q9BTE7 237 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TMEM109Q9BVC6 243 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 TTTY12Q9BZ98 90 aa0.66□□□□□ -2.3
TOP2A-202ENST00000577541 CXCL16Q9H2A7 254 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms