RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 A0A1B0GV90 55 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 A0A1B0GW55 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 IGSF23A1L1A6 192 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 FAM166BA8MTA8 275 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 CEACAM18A8MTB9 384 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 KRTAP4-16G5E9R7 235 aaPredicted RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 M0R1B8 84 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 MANBAO00462 879 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TXNDC9O14530 226 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 STK16O75716 305 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 SOX14O95416 240 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 KLF8O95600 359 aaPredicted RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 MT-CO2P00403 227 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 IFNA10P01566 189 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 IGHV2-5P01817 119 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 C8GP07360 202 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4L2P0CJ85 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4L3P0CJ86 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4L5P0CJ88 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4L6P0CJ89 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4L7P0CJ90 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 MPC1LP0DKB6 136 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 FOLR1P15328 257 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 COX7A1P24310 79 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 RCVRNP35243 200 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DLX1P56177 255 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR12D2P58182 307 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 NAA20P61599 178 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 NUTF2P61970 127 aaKnown RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 RPS14P62263 151 aaKnown RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 HIST1H3AP68431 136 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 H3F3AP84243 136 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DEFA6Q01524 100 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 RPL18AQ02543 176 aaKnown RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 GGTLC2Q14390 218 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 ZBED5Q49AG3 693 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 CCSMST1Q4G0I0 132 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 FAM27D1Q5T7N8 215 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 FAM78BQ5VT40 261 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 UBE2UQ5VVX9 321 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4L9Q6RFH8 374 aaPredicted RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 HIST2H3AQ71DI3 136 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TCF24Q7RTU0 167 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 GRINAQ7Z429 371 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DEFB107AQ8IZN7 70 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 LRRC18Q8N456 261 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 PNKDQ8N490 385 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 NKAPP1Q8N9T2 125 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR8J3Q8NGG0 315 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR4C13Q8NGP0 309 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR9I1Q8NGQ6 314 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR4X1Q8NH49 305 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TNFAIP8L1Q8WVP5 186 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 ASB17Q8WXJ9 295 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TCEAL3Q969E4 200 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TMEM203Q969S6 136 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 COX14Q96I36 57 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 SEC22AQ96IW7 307 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 SCGB3A2Q96PL1 93 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TCEAL7Q9BRU2 100 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 THTPAQ9BU02 230 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 RPF2Q9H7B2 306 aaKnown RBP3.19□□□□□ -1.9
NUP88-213ENST00000576862 HEBP1Q9NRV9 189 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 AIG1Q9NVV5 245 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DUX4Q9UBX2 424 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 DKKL1Q9UK85 242 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 ING4Q9UNL4 249 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TRAPPC4Q9Y296 219 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 RNF11Q9Y3C5 154 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 OR51B2Q9Y5P1 312 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 TRIOBPQ9H2D6 2365 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 LAMA3Q16787 3333 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 GREB1Q4ZG55 1949 aa3.19□□□□□ -1.9
NUP88-213ENST00000576862 PLXNA4Q9HCM2 1894 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 DAPL1A0PJW8 107 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 LOC730098B7Z3J9 87 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 FXYD1O00168 92 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 TNFRSF11BO00300 401 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 SLC17A3O00476 420 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 DLEU1O43261 78 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 ORC5O43913 435 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 SERPINB7O75635 380 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 POP7O75817 140 aaKnown RBP3.18□□□□□ -1.9
NUP88-213ENST00000576862 GPR75O95800 540 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 GIPP09681 153 aaPredicted RBP3.18□□□□□ -1.9
NUP88-213ENST00000576862 SMIM6P0DI80 62 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 PYCR1P32322 319 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 TALDO1P37837 337 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 NUDT2P50583 147 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 BIDP55957 195 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 RAB38P57729 211 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 GNG2P59768 71 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 PFN3P60673 137 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 PPP1CBP62140 327 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 GNG3P63215 75 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 FMODQ06828 376 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 PMVKQ15126 192 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 C4orf26Q17RF5 130 aa3.18□□□□□ -1.9
NUP88-213ENST00000576862 LRRC75BQ2VPJ9 315 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms