RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 IL36GQ9NZH8 169 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 SPG11Q96JI7 2443 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 COL4A6Q14031 1691 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 TRPM7Q96QT4 1865 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 IGHV3-21A0A0B4J1V1 117 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 RRP8O43159 456 aaKnown RBP15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 HRASP01112 189 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 IGHV3-48P01763 117 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 CD1BP29016 333 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 OR4C5Q8NGB2 326 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 SARAFQ96BY9 339 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 WNT5AP41221 380 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 ZNF600Q6ZNG1 722 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 GALNT14Q96FL9 552 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 CHRNB4P30926 498 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 SUB1P53999 127 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 SH2D2AQ9NP31 389 aa15.32■□□□□ 0.04
ATPAF1-214ENST00000576409 PLAUP00749 431 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 HBZP02008 142 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 REG1BP48304 166 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 MRPS11P82912 194 aaKnown RBP15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 DMWDQ09019 674 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 CBY1Q9Y3M2 126 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 LOC390937A0A1W2PQ73 354 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 CCKARP32238 428 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 SOX8P57073 446 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 RPEL1Q2QD12 228 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 MISP3Q96FF7 219 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 PRR14LQ5THK1 2151 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 ZNF891A8MT65 544 aaPredicted RBP15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 TCF21O43680 179 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 SLC25A5P05141 298 aaKnown RBP15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 ATOH7Q8N100 152 aa15.31■□□□□ 0.04
ATPAF1-214ENST00000576409 A0A0G2JMM0 328 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 A0A1W2PPB8 328 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 A0A1W2PRS3 328 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HELTA6NFD8 242 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 NKX6-3A6NJ46 265 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 KIR3DP1A8MWS1 328 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 LDLRAD4O15165 306 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 SRSF10O75494 262 aaKnown RBP15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HOXA5P20719 270 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 FXYD3Q14802 87 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 CSRP2Q16527 193 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 ABHD12Q8N2K0 398 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 NHLRC2Q8NBF2 726 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 OR2M7Q8NG81 312 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 LRRC30A6NM36 301 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 S1PR2O95136 353 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 Q56UQ5 140 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 DDA1Q9BW61 102 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 CHCHD2Q9Y6H1 151 aaPredicted RBP15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BKO60814 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BJP06899 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 CELA3AP09093 270 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BOP23527 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BBP33778 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 CASP6P55212 293 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BDP58876 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BCP62807 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST2H2BEQ16778 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 OR8I2Q8N0Y5 310 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 OR2D3Q8NGH3 330 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 ZNF596Q8TC21 504 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 CCL17Q92583 94 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BHQ93079 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 ZDHHC16Q969W1 377 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BNQ99877 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST1H2BMQ99879 126 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 SLC45A2Q9UMX9 530 aa15.3■□□□□ 0.04
ATPAF1-214ENST00000576409 CD5P06127 495 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 CD55P08174 381 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 CXCL1P09341 107 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 SUCLG1P53597 346 aaKnown RBP15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 CFHR1Q03591 330 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 HIST3H3Q16695 136 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 MOGAT3Q86VF5 341 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 AUP1Q9Y679 476 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 AGAP20933 346 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 ZNF137PP52743 207 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 C11orf42Q8N5U0 333 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 NUDT16L1Q9BRJ7 211 aaKnown RBP15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 WDR61Q9GZS3 305 aaKnown RBP15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 IGHV1-45A0A0A0MS14 117 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 MT-CO3P00414 261 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 OR10J1P30954 320 aa15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 RANP62826 216 aaKnown RBP15.29■□□□□ 0.04
ATPAF1-214ENST00000576409 OOEPA6NGQ2 149 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 C5orf52A6NGY3 159 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 COL10A1Q03692 680 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 PCOLCEQ15113 449 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 ARSJQ5FYB0 599 aaPredicted RBP15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 DRAM1Q8N682 238 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 OR51G1Q8NGK1 321 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 CYYR1Q96J86 154 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 IMMP2LQ96T52 175 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 ZSWIM8A7E2V4 1837 aa15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 ZNF729A6NN14 1252 aaPredicted RBP15.28■□□□□ 0.04
ATPAF1-214ENST00000576409 CBLN1P23435 193 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms