RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	CEACAM18	A8MTB9	384 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	INMT-MINDY4	F8WBC2	141 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	MFNG	O00587	321 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CAT	P04040	527 aa	Known RBP	4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CHTF8	P0CG12	524 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CYBA	P13498	195 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ORM2	P19652	201 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	GRPR	P30550	384 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	AGTR1	P30556	359 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	TGFBR1	P36897	503 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	HCCS	P53701	268 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	EMP1	P54849	157 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CAV1	Q03135	178 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PPP1R1A	Q13522	171 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	IQCJ	Q1A5X6	159 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	TPTE2P1	Q5T6R2	138 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	C1orf195	Q5TG92	126 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CALHM3	Q86XJ0	350 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR8I2	Q8N0Y5	310 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OSR2	Q8N2R0	312 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR52E2	Q8NGJ4	325 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR51Q1	Q8NH59	317 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	RXFP2	Q8WXD0	754 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	DDIT4L	Q96D03	193 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR4K3	Q96R72	315 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	MGLL	Q99685	303 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PDCD1LG2	Q9BQ51	273 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR2J1	Q9GZK6	312 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	DEFB127	Q9H1M4	99 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	MS4A6A	Q9H2W1	248 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	SRMS	Q9H3Y6	488 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	METTL17	Q9H7H0	456 aa	Predicted RBP	4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	RETN	Q9HD89	108 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CLCF1	Q9UBD9	225 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	HS3ST2	Q9Y278	367 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PLEKHH2	Q8IVE3	1493 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ARHGAP23	Q9P227	1491 aa		4.4	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CASKIN1	Q8WXD9	1431 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909		G3V3Q6	166 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	MYL12B	O14950	172 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	EDF1	O60869	148 aa	Known RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	LSM8	O95777	96 aa	Known RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR5G3	P0C626	314 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	HIST1H1D	P16402	221 aa	Known RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	RBMX	P38159	391 aa	Known RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	GPR6	P46095	362 aa	Predicted RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	SUB1	P53999	127 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	SLC35A2	P78381	396 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	TNFAIP6	P98066	277 aa	Predicted RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	DEFA5	Q01523	94 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	UNC119	Q13432	240 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	HMGN3	Q15651	99 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	IL17A	Q16552	155 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	LRRC26	Q2I0M4	334 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	SPANXN3	Q5MJ09	141 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	C10orf91	Q5T1B1	145 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	TMEM215	Q68D42	235 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	IL34	Q6ZMJ4	242 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	FAM231D	Q6ZW35	169 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ZNF720	Q7Z2F6	126 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	VKORC1L1	Q8N0U8	176 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR4S1	Q8NGB4	309 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR4K5	Q8NGD3	323 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR51T1	Q8NGJ9	327 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR1N2	Q8NGR9	330 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR5W2	Q8NH69	310 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	RXFP4	Q8TDU9	374 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ZNF431	Q8TF32	576 aa	Predicted RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR5P3	Q8WZ94	311 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PTX4	Q96A99	478 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PHYHIPL	Q96FC7	376 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	IMMP1L	Q96LU5	166 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	HES7	Q9BYE0	225 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	IFI27L2	Q9H2X8	130 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	POPDC3	Q9HBV1	291 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	FGF20	Q9NP95	211 aa	Predicted RBP	4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ACER3	Q9NUN7	267 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	IDI2-AS1	Q9NZ38	188 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	XCL2	Q9UBD3	114 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PCYOX1	Q9UHG3	505 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	POLR1D	Q9Y2S0	133 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ADAMTS12	P58397	1594 aa		4.39	□□□□□ -1.71
TOM1L1-222	ENST00000575909	ABCC5	O15440	1437 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PLA2R1	Q13018	1463 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	KIF20B	Q96Q89	1820 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	TMEM150B	A6NC51	233 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	GABRP	O00591	440 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	OR2T1	O43869	369 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	MOS	P00540	346 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	HLA-DQB2	P05538	268 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	GABRA3	P34903	492 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	GZMM	P51124	257 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	PSG9	Q00887	426 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	KIAA0087	Q14695	138 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	FAM74A1	Q5RGS3	127 aa		4.38	□□□□□ -1.71
TOM1L1-222	ENST00000575909	FAM183BP	Q6ZVS7	135 aa		4.38	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms