RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 KIF25Q9UIL4 384 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 RNF150Q9ULK6 438 aa4.48□□□□□ -1.69
SMG6-219ENST00000575663 HSPG2P98160 4391 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 IGHV7-81A0A0B4J1V7 117 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 A0A0J9YWU9 116 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 A0A1B0GTI1 187 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 XKRY2A2RUG3 117 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 RAB19A4D1S5 217 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 PGPEP1LA6NFU8 196 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 NPIPB11E5RHQ5 1161 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 WRBO00258 174 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 MYL12BO14950 172 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 DEGS1O15121 323 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 SLC22A1O15245 554 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 NBR2O15453 112 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 SULT1C4O75897 302 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 APOL3O95236 402 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 MT-ND2P03891 347 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 MRPL3P09001 348 aaKnown RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 BLVRBP30043 206 aaPredicted RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 MTCP1P56278 107 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 WNT4P56705 351 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 TNFRSF9Q07011 255 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 TMEM267Q0VDI3 215 aaPredicted RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 MLLT11Q13015 90 aaPredicted RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 TPBGQ13641 420 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 SMN1Q16637 294 aaKnown RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 TATDN3Q17R31 274 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 MOGAT2Q3SYC2 334 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 PAN3Q58A45 887 aaKnown RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 PLEKHG7Q6ZR37 379 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 Q6ZSR3 168 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 MS4A15Q8N5U1 240 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 LINC00311Q8N616 119 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 IQCF1Q8N6M8 205 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 C8orf31Q8N9H6 132 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 OR52I1Q8NGK6 324 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 RFESDQ8TAC1 157 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 LHFPL5Q8TAF8 219 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 ABHD5Q8WTS1 349 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 PHYHIPQ92561 330 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 SPSB1Q96BD6 273 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 LGALS12Q96DT0 336 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 ATP6V0BQ99437 205 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 CNN2Q99439 309 aaKnown RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 MGLLQ99685 303 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 CCDC90BQ9GZT6 254 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 RBM38Q9H0Z9 239 aaKnown RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 SLC35D1Q9NTN3 355 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 PAK1IP1Q9NWT1 392 aaPredicted RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 PEMTQ9UBM1 199 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 RSL24D1Q9UHA3 163 aaKnown RBP4.47□□□□□ -1.69
SMG6-219ENST00000575663 A3GALT2U3KPV4 340 aa4.47□□□□□ -1.69
SMG6-219ENST00000575663 C13orf42A0A1B0GVH6 325 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ZNF320A2RRD8 509 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 OR11H12B2RN74 326 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ZNF736B4DX44 427 aaPredicted RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 SDCBPO00560 298 aaPredicted RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 RGS13O14921 159 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 SOX15O60248 233 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 SRSF10O75494 262 aaKnown RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 KDM4BO94953 1096 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 GABARAPO95166 117 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 RAB3DO95716 219 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 DHFRP00374 187 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 KRT8P05787 483 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 LIMS3P0CW19 117 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 LIMS4P0CW20 117 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 CGB3P0DN86 165 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 CGB7P0DN87 165 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 KCNJ3P48549 501 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ZNF137PP52743 207 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 CRIP2P52943 208 aaPredicted RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 HCCSP53701 268 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 SYNJ2BPP57105 145 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ACTBP60709 375 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 PAX5Q02548 391 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 PDZK1IP1Q13113 114 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 PLGLAQ15195 96 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 NEDD8Q15843 81 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 C5orf64Q2M2E5 130 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ACTBL2Q562R1 376 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ZNF322Q6U7Q0 402 aaPredicted RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 Q6ZNX1 250 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 SLC25A48Q6ZT89 311 aaKnown RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 SLC16A13Q7RTY0 426 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 LYG2Q86SG7 212 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 DEFB125Q8N687 156 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 ZNF485Q8NCK3 441 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 OR5T1Q8NG75 326 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 OR52M1Q8NGK5 317 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 CASTOR1Q8WTX7 329 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 PHLDA1Q8WV24 401 aaPredicted RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 TSEN15Q8WW01 171 aaKnown RBP4.46□□□□□ -1.7
SMG6-219ENST00000575663 OVOL2Q9BRP0 275 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 GGTLC1Q9BX51 225 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 AMBNQ9NP70 447 aa4.46□□□□□ -1.7
SMG6-219ENST00000575663 RAB9BQ9NP90 201 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms