RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	PSMB11	A5LHX3	300 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	GNB3	P16520	340 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	IL3RA	P26951	378 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	TNFSF8	P32971	234 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	OR3A3	P47888	321 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	MRPS15	P82914	257 aa	Known RBP	11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	PITPNA	Q00169	270 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	ZNF260	Q3ZCT1	412 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	HACD4	Q5VWC8	232 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	CNIH2	Q6PI25	160 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	SLC35E3	Q7Z769	313 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	OR4X2	Q8NGF9	303 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	S1PR3	Q99500	378 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	NABP2	Q9BQ15	211 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	HSPB9	Q9BQS6	159 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	ZNF251	Q9BRH9	671 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	ABHD14A	Q9BUJ0	271 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	RAB9B	Q9NP90	201 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	KCNK7	Q9Y2U2	307 aa		11.16	□□□□□ -0.62
EDC4-210	ENST00000575507	PROP1	O75360	226 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	SCT	P09683	121 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	CD3G	P09693	182 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	IGLL1	P15814	213 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	CNTFR	P26992	372 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	GPR12	P47775	334 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	TAS2R20	P59543	309 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	LSAMP	Q13449	338 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	LY6G6F	Q5SQ64	297 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	STPG2	Q8N412	459 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	FAM71E2	Q8N5Q1	922 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	IL1F10	Q8WWZ1	152 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	CMSS1	Q9BQ75	279 aa	Known RBP	11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	MRPL20	Q9BYC9	149 aa	Known RBP	11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	AUNIP	Q9H7T9	357 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	C12orf4	Q9NQ89	552 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	LIN7C	Q9NUP9	197 aa	Known RBP	11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	OR1A1	Q9P1Q5	309 aa		11.15	□□□□□ -0.62
EDC4-210	ENST00000575507	TRBV6-6	A0A0A6YYG2	114 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	TMEM235	A6NFC5	223 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	ST8SIA5	O15466	376 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	GNG2	P59768	71 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	ARFRP1	Q13795	201 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	SPANXN2	Q5MJ10	180 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	ETV3L	Q6ZN32	361 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	LCNL1	Q6ZST4	164 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	ZNF833P	Q6ZTB9	187 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	MOB1B	Q7L9L4	216 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	SETD6	Q8TBK2	473 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	CHPT1	Q8WUD6	406 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	IFI27L2	Q9H2X8	130 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	CHMP1A	Q9HD42	196 aa	Predicted RBP	11.14	□□□□□ -0.63
EDC4-210	ENST00000575507		Q9N2K0	584 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	MGAT4A	Q9UM21	535 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	MRPS7	Q9Y2R9	242 aa	Known RBP	11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	CMYA5	Q8N3K9	4069 aa		11.14	□□□□□ -0.63
EDC4-210	ENST00000575507	NOTCH1	P46531	2555 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	SAA2-SAA4	A0A096LPE2	208 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	IGKV1-6	A0A0C4DH72	117 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	FABP12	A6NFH5	140 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	TXNL1	O43396	289 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	HLA-DQB1	P01920	261 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	SAA2	P0DJI9	122 aa	Predicted RBP	11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	PF4V1	P10720	104 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	DTYMK	P23919	212 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	PTBP1	P26599	531 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	ETV6	P41212	452 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	MRPS10	P82664	201 aa	Known RBP	11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	RPL39P5	Q59GN2	51 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	KHDC1L	Q5JSQ8	128 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	PYHIN1	Q6K0P9	492 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	CCDC190	Q86UF4	302 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	ABHD14B	Q96IU4	210 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	SOST	Q9BQB4	213 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	AGMAT	Q9BSE5	352 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	SCPEP1	Q9HB40	452 aa		11.13	□□□□□ -0.63
EDC4-210	ENST00000575507	SULT1C2	O00338	296 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	CD33	P20138	364 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	PRSS3	P35030	304 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	CBX5	P45973	191 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	LINC00205	P59089	165 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	ACTB	P60709	375 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	RPL23A	P62750	156 aa	Known RBP	11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	IL18	Q14116	193 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	RASL11B	Q9BPW5	248 aa		11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.12	□□□□□ -0.63
EDC4-210	ENST00000575507	AP4M1	O00189	453 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	CTDSPL	O15194	276 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	RGS11	O94810	467 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	RPLP1	P05386	114 aa	Known RBP	11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	CT45A6	P0DMU7	189 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	CT45A5	P0DMU8	189 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	CT45A7	P0DMV0	189 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	CEACAM6	P40199	344 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	HLA-DRB3	P79483	266 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	CFHR3	Q02985	330 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	MMD	Q15546	238 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	FAM131A	Q6UXB0	335 aa		11.11	□□□□□ -0.63
EDC4-210	ENST00000575507	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.11	□□□□□ -0.63
EDC4-210	ENST00000575507		Q6ZS49	121 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms