RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 REG1BP48304 166 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 FXYD4P59646 89 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 PLA1AQ53H76 456 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 RPL39P5Q59GN2 51 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 ZNF57Q68EA5 555 aaPredicted RBP13.78□□□□□ -0.2
NUP88-210ENST00000574867 TMEM86BQ8N661 226 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 OR5R1Q8NH85 324 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 POMT1Q9Y6A1 747 aa13.78□□□□□ -0.2
NUP88-210ENST00000574867 BTBD17A6NE02 478 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 IFNA2P01563 188 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 PAX6P26367 422 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 IER3P46695 156 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 HILS1P60008 231 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 LSAMPQ13449 338 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 SECTM1Q8WVN6 248 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 SSX3Q99909 188 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 PRRT1Q99946 306 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 FXYD6Q9H0Q3 95 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 SDHAF2Q9NX18 166 aa13.77□□□□□ -0.21
NUP88-210ENST00000574867 J3QRK9 145 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 TIMM23O14925 209 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 BAMBIQ13145 260 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 HABP2Q14520 560 aaPredicted RBP13.76□□□□□ -0.21
NUP88-210ENST00000574867 FAAP20Q6NZ36 180 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 LHFPL1Q86WI0 220 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 OR56B4Q8NH76 319 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 SLC5A7Q9GZV3 580 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 SLC2A8Q9NY64 477 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 TCF21O43680 179 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 LPCAT3Q6P1A2 487 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
NUP88-210ENST00000574867 SCP2D1Q9UJQ7 156 aa13.76□□□□□ -0.21
NUP88-210ENST00000574867 H3BUX3 64 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 M0R1X1 148 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 HOXA3O43365 443 aaPredicted RBP13.75□□□□□ -0.21
NUP88-210ENST00000574867 ZNF735P0CB33 412 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 ECI1P42126 302 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 UCP3P55916 312 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 SCGB2B2Q4G0G5 96 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 AADACL3Q5VUY0 350 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 DRAM1Q8N682 238 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 ZBTB34Q8NCN2 500 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 TERB2Q8NHR7 220 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 CFHR4Q92496 578 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 AKR1E2Q96JD6 320 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 HRASLSQ9HDD0 168 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 MCUBQ9NWR8 336 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 DNAJC9-AS1A6NH13 148 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 OR5H14A6NHG9 310 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 CLDN34H7C241 214 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 PROP1O75360 226 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 IGHV4-59P01825 116 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 ADTRPQ96IZ2 230 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 NABP2Q9BQ15 211 aa13.75□□□□□ -0.21
NUP88-210ENST00000574867 C7orf50Q9BRJ6 194 aaKnown RBP13.75□□□□□ -0.21
NUP88-210ENST00000574867 IGLV2-14P01704 120 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 CD1BP29016 333 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 SLC38A6Q8IZM9 456 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 OR51S1Q8NGJ8 323 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 C5orf30Q96GV9 206 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 CCL28Q9NRJ3 127 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 PITPNC1Q9UKF7 332 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 VPREB3Q9UKI3 123 aa13.74□□□□□ -0.21
NUP88-210ENST00000574867 NAP1L6A6NFF2 107 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 FAM90A9PA6NNJ1 464 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 FAM106CPP0CH98 169 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 CT45A6P0DMU7 189 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 CT45A5P0DMU8 189 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 CT45A7P0DMV0 189 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 LIAT1Q6ZQX7 453 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 ZNF818PQ6ZRF7 136 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 THNSL2Q86YJ6 484 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 HSD17B10Q99714 261 aaKnown RBP13.73□□□□□ -0.21
NUP88-210ENST00000574867 TCF19Q9Y242 345 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 CENPXA8MT69 81 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 MC5RP33032 325 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 THBS3P49746 956 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 TAGLNQ01995 201 aaKnown RBP13.73□□□□□ -0.21
NUP88-210ENST00000574867 SURF2Q15527 256 aaPredicted RBP13.73□□□□□ -0.21
NUP88-210ENST00000574867 SLC9A3R2Q15599 337 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 IDO2Q6ZQW0 420 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 CMTM1Q8IZ96 169 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 BVESQ8NE79 360 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 OR5AN1Q8NGI8 311 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 PIFOQ8TCI5 191 aa13.73□□□□□ -0.21
NUP88-210ENST00000574867 GPR31O00270 319 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 S100GP29377 79 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 GNRHRP30968 328 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 DUTP33316 252 aaKnown RBP13.72□□□□□ -0.21
NUP88-210ENST00000574867 ZNF66Q6ZN08 573 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
NUP88-210ENST00000574867 CAPSLQ8WWF8 208 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 ZNF486Q96H40 463 aaPredicted RBP13.72□□□□□ -0.21
NUP88-210ENST00000574867 TSC22D3Q99576 134 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 RSRP1Q9BUV0 290 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 ESM1Q9NQ30 184 aa13.72□□□□□ -0.21
NUP88-210ENST00000574867 H0YJW9 148 aa13.71□□□□□ -0.21
NUP88-210ENST00000574867 UPK1BO75841 260 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms